Uses of Class
ubic.gemma.model.expression.experiment.FactorValueValueObject

Packages that use FactorValueValueObject

Package	Description
ubic.gemma.core.tasks.visualization
ubic.gemma.model.analysis.expression.diff
ubic.gemma.model.expression.biomaterial
ubic.gemma.model.expression.experiment
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.rest.serializers
ubic.gemma.web.controller.expression.biomaterial
ubic.gemma.web.controller.expression.experiment

Uses of FactorValueValueObject in ubic.gemma.core.tasks.visualization

Constructors in ubic.gemma.core.tasks.visualization with parameters of type FactorValueValueObject

Modifier	Constructor	Description
	Condition(ExpressionExperimentValueObject experiment, DifferentialExpressionAnalysisValueObject analysis, DiffExResultSetSummaryValueObject resultSet, FactorValueValueObject factorValue)

Uses of FactorValueValueObject in ubic.gemma.model.analysis.expression.diff

Methods in ubic.gemma.model.analysis.expression.diff that return FactorValueValueObject

Modifier and Type	Method	Description
FactorValueValueObject	DiffExResultSetSummaryValueObject.getBaselineGroup()
FactorValueValueObject	DifferentialExpressionAnalysisValueObject.getSubsetFactorValue()

Methods in ubic.gemma.model.analysis.expression.diff that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Map<Long,Collection<FactorValueValueObject>>	DifferentialExpressionAnalysisValueObject.getFactorValuesUsed()	Deprecated. This was renamed for clarity.
Map<Long,Collection<FactorValueValueObject>>	DifferentialExpressionAnalysisValueObject.getFactorValuesUsedByExperimentalFactorId()	Produce a mapping of ExperimentalFactor IDs to FactorValue VOs used in this analysis.

Methods in ubic.gemma.model.analysis.expression.diff with parameters of type FactorValueValueObject

Modifier and Type	Method	Description
void	DiffExResultSetSummaryValueObject.setBaselineGroup(FactorValueValueObject baselineGroup)
void	DifferentialExpressionAnalysisValueObject.setSubsetFactorValue(FactorValueValueObject subsetFactorValue)

Method parameters in ubic.gemma.model.analysis.expression.diff with type arguments of type FactorValueValueObject

Modifier and Type	Method	Description
void	DifferentialExpressionAnalysisValueObject.setFactorValuesUsed(Map<Long,Collection<FactorValueValueObject>> factorValuesUsed)

Uses of FactorValueValueObject in ubic.gemma.model.expression.biomaterial

Method parameters in ubic.gemma.model.expression.biomaterial with type arguments of type FactorValueValueObject

Modifier and Type	Method	Description
void	BioMaterialValueObject.setFactorValueObjects(Collection<FactorValueValueObject> factorValueObjects)

Uses of FactorValueValueObject in ubic.gemma.model.expression.experiment

Methods in ubic.gemma.model.expression.experiment that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Collection<FactorValueValueObject>	ExperimentalFactorValueObject.getValues()

Method parameters in ubic.gemma.model.expression.experiment with type arguments of type FactorValueValueObject

Modifier and Type	Method	Description
void	ExperimentalFactorValueObject.setValues(Collection<FactorValueValueObject> values)

Uses of FactorValueValueObject in ubic.gemma.persistence.service.expression.experiment

Methods in ubic.gemma.persistence.service.expression.experiment that return FactorValueValueObject

Modifier and Type	Method	Description
protected FactorValueValueObject	FactorValueDaoImpl.doLoadValueObject(FactorValue entity)

Methods in ubic.gemma.persistence.service.expression.experiment that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Collection<FactorValueValueObject>	ExpressionExperimentSubSetService.getFactorValuesUsed(Long subSetId, Long experimentalFactor)
Collection<FactorValueValueObject>	ExpressionExperimentSubSetServiceImpl.getFactorValuesUsed(Long subSetId, Long experimentalFactor)

Uses of FactorValueValueObject in ubic.gemma.rest.serializers

Methods in ubic.gemma.rest.serializers with parameters of type FactorValueValueObject

Modifier and Type	Method	Description
protected void	FactorValueValueObjectSerializer.serializeInternal(FactorValueValueObject factorValueValueObject, com.fasterxml.jackson.core.JsonGenerator jsonGenerator, com.fasterxml.jackson.databind.SerializerProvider serializerProvider)	Deprecated.

Uses of FactorValueValueObject in ubic.gemma.web.controller.expression.biomaterial

Methods in ubic.gemma.web.controller.expression.biomaterial that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Collection<FactorValueValueObject>	BioMaterialController.getFactorValues(EntityDelegator<BioMaterial> bm)

Uses of FactorValueValueObject in ubic.gemma.web.controller.expression.experiment

Methods in ubic.gemma.web.controller.expression.experiment that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Collection<FactorValueValueObject>	ExperimentalDesignController.getFactorValues(EntityDelegator<ExperimentalFactor> e)	AJAX
Collection<FactorValueValueObject>	ExpressionExperimentController.getFactorValues(EntityDelegator<ExperimentalFactor> e)	AJAX
Collection<FactorValueValueObject>	ExperimentalDesignController.getFactorValuesWithCharacteristics(EntityDelegator<ExperimentalFactor> e)	AJAX

Methods in ubic.gemma.web.controller.expression.experiment with parameters of type FactorValueValueObject

Modifier and Type	Method	Description
void	ExperimentalDesignController.deleteFactorValueCharacteristics(FactorValueValueObject[] fvvos)	AJAX
void	ExperimentalDesignController.updateFactorValueCharacteristics(FactorValueValueObject[] fvvos)	AJAX