Uses of Class
ubic.gemma.model.expression.experiment.FactorValueValueObject

Packages that use FactorValueValueObject

Package	Description
ubic.gemma.core.tasks.visualization
ubic.gemma.model.analysis.expression.diff
ubic.gemma.model.expression.biomaterial
ubic.gemma.model.expression.experiment
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.rest.serializers

Uses of FactorValueValueObject in ubic.gemma.core.tasks.visualization

Constructors in ubic.gemma.core.tasks.visualization with parameters of type FactorValueValueObject

Modifier	Constructor	Description
	Condition(ExpressionExperimentValueObject experiment, DifferentialExpressionAnalysisValueObject analysis, DiffExResultSetSummaryValueObject resultSet, FactorValueValueObject factorValue)

Uses of FactorValueValueObject in ubic.gemma.model.analysis.expression.diff

Methods in ubic.gemma.model.analysis.expression.diff that return FactorValueValueObject

Modifier and Type	Method	Description
FactorValueValueObject	DiffExResultSetSummaryValueObject.getBaselineGroup()
FactorValueValueObject	DifferentialExpressionAnalysisValueObject.getSubsetFactorValue()

Methods in ubic.gemma.model.analysis.expression.diff that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Map<Long, Collection<FactorValueValueObject>>	DifferentialExpressionAnalysisValueObject.getFactorValuesUsed()	Deprecated. This was renamed for clarity.
Map<Long, Collection<FactorValueValueObject>>	DifferentialExpressionAnalysisValueObject.getFactorValuesUsedByExperimentalFactorId()	Produce a mapping of ExperimentalFactor IDs to FactorValue VOs used in this analysis.

Methods in ubic.gemma.model.analysis.expression.diff with parameters of type FactorValueValueObject

Modifier and Type	Method	Description
void	DiffExResultSetSummaryValueObject.setBaselineGroup(FactorValueValueObject baselineGroup)
void	DifferentialExpressionAnalysisValueObject.setSubsetFactorValue(FactorValueValueObject subsetFactorValue)

Method parameters in ubic.gemma.model.analysis.expression.diff with type arguments of type FactorValueValueObject

Modifier and Type	Method	Description
void	DifferentialExpressionAnalysisValueObject.setFactorValuesUsed(Map<Long, Collection<FactorValueValueObject>> factorValuesUsed)

Uses of FactorValueValueObject in ubic.gemma.model.expression.biomaterial

Method parameters in ubic.gemma.model.expression.biomaterial with type arguments of type FactorValueValueObject

Modifier and Type	Method	Description
void	BioMaterialValueObject.setFactorValueObjects(Collection<FactorValueValueObject> factorValueObjects)

Uses of FactorValueValueObject in ubic.gemma.model.expression.experiment

Methods in ubic.gemma.model.expression.experiment that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Collection<FactorValueValueObject>	ExperimentalFactorValueObject.getValues()

Method parameters in ubic.gemma.model.expression.experiment with type arguments of type FactorValueValueObject

Modifier and Type	Method	Description
void	ExperimentalFactorValueObject.setValues(Collection<FactorValueValueObject> values)

Uses of FactorValueValueObject in ubic.gemma.persistence.service.expression.experiment

Subclasses with type arguments of type FactorValueValueObject in ubic.gemma.persistence.service.expression.experiment

Modifier and Type	Class	Description
class	FactorValueDaoImpl	Base Spring DAO Class: is able to create, update, remove, load, and find objects of type ubic.gemma.model.expression.experiment.FactorValue.
class	FactorValueServiceImpl	Spring Service base class for FactorValueService, provides access to all services and entities referenced by this service.

Subinterfaces with type arguments of type FactorValueValueObject in ubic.gemma.persistence.service.expression.experiment

Modifier and Type	Interface	Description
interface	FactorValueDao
interface	FactorValueService

Methods in ubic.gemma.persistence.service.expression.experiment that return FactorValueValueObject

Modifier and Type	Method	Description
protected FactorValueValueObject	FactorValueDaoImpl.doLoadValueObject(FactorValue entity)

Methods in ubic.gemma.persistence.service.expression.experiment that return types with arguments of type FactorValueValueObject

Modifier and Type	Method	Description
Collection<FactorValueValueObject>	ExpressionExperimentSubSetService.getFactorValuesUsed(Long subSetId, Long experimentalFactor)
Collection<FactorValueValueObject>	ExpressionExperimentSubSetServiceImpl.getFactorValuesUsed(Long subSetId, Long experimentalFactor)
Collection<FactorValueValueObject>	ExpressionExperimentSubSetReadService.getFactorValuesUsedAsVO(Long subSetId, Long experimentalFactor)	VO-form variant of ExpressionExperimentSubSetReadService.getFactorValuesUsed(ExpressionExperimentSubSet, ExperimentalFactor) accepting plain IDs.
Collection<FactorValueValueObject>	ExpressionExperimentSubSetReadServiceImpl.getFactorValuesUsedAsVO(Long subSetId, Long experimentalFactor)

Uses of FactorValueValueObject in ubic.gemma.rest.serializers

Subclasses with type arguments of type FactorValueValueObject in ubic.gemma.rest.serializers

Modifier and Type	Class	Description
class	FactorValueValueObjectSerializer	Deprecated.

Methods in ubic.gemma.rest.serializers with parameters of type FactorValueValueObject

Modifier and Type	Method	Description
protected void	FactorValueValueObjectSerializer.serializeInternal(FactorValueValueObject factorValueValueObject, com.fasterxml.jackson.core.JsonGenerator jsonGenerator, com.fasterxml.jackson.databind.SerializerProvider serializerProvider)	Deprecated.