Package ubic.gemma.model.analysis.expression.diff

Class DifferentialExpressionAnalysisResultValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<DifferentialExpressionAnalysisResult>

ubic.gemma.model.analysis.AnalysisResultValueObject<DifferentialExpressionAnalysisResult>

ubic.gemma.model.analysis.expression.diff.DifferentialExpressionAnalysisResultValueObject

All Implemented Interfaces:

Serializable, Identifiable

Direct Known Subclasses:

DatasetsWebService.DifferentialExpressionAnalysisResultByGeneValueObject

public class DifferentialExpressionAnalysisResultValueObject
extends AnalysisResultValueObject<DifferentialExpressionAnalysisResult>

Unlike DiffExResultSetSummaryValueObject, this value object is meant for the public API.

See Also:

• Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
DifferentialExpressionAnalysisResultValueObject()
DifferentialExpressionAnalysisResultValueObject(DifferentialExpressionAnalysisResult result, boolean includeFactorValues)
DifferentialExpressionAnalysisResultValueObject(DifferentialExpressionAnalysisResult result, boolean includeFactorValuesInContrasts, Set<Gene> genes, boolean includeTaxonInGenes)

Method Summary

Modifier and Type	Method	Description
protected boolean	canEqual(Object other)
boolean	equals(Object o)
List<ContrastResultValueObject>	getContrasts()
Double	getCorrectedPvalue()
List<GeneValueObject>	getGenes()
Long	getProbeId()
String	getProbeName()
Double	getPValue()
Double	getRank()
int	hashCode()
void	setContrasts(List<ContrastResultValueObject> contrasts)
void	setCorrectedPvalue(Double correctedPvalue)
void	setGenes(List<GeneValueObject> genes)
void	setProbeId(Long probeId)
void	setProbeName(String probeName)
void	setPValue(Double pValue)
void	setRank(Double rank)
String	toString()

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

getId, setId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

DifferentialExpressionAnalysisResultValueObject

public DifferentialExpressionAnalysisResultValueObject()

DifferentialExpressionAnalysisResultValueObject

public DifferentialExpressionAnalysisResultValueObject(DifferentialExpressionAnalysisResult result,
 boolean includeFactorValues)

DifferentialExpressionAnalysisResultValueObject

public DifferentialExpressionAnalysisResultValueObject(DifferentialExpressionAnalysisResult result,
 boolean includeFactorValuesInContrasts,
 Set<Gene> genes,
 boolean includeTaxonInGenes)

Method Details

getProbeId

public Long getProbeId()

getProbeName

public String getProbeName()

getGenes

public List<GeneValueObject> getGenes()

getPValue

@Nullable
public Double getPValue()

getCorrectedPvalue

@Nullable
public Double getCorrectedPvalue()

getRank

@Nullable
public Double getRank()

getContrasts

public List<ContrastResultValueObject> getContrasts()

setProbeId

public void setProbeId(Long probeId)

setProbeName

public void setProbeName(String probeName)

setGenes

public void setGenes(List<GeneValueObject> genes)

setPValue

public void setPValue(@Nullable
 Double pValue)

setCorrectedPvalue

public void setCorrectedPvalue(@Nullable
 Double correctedPvalue)

setRank

public void setRank(@Nullable
 Double rank)

setContrasts

public void setContrasts(List<ContrastResultValueObject> contrasts)

toString

public String toString()

Overrides:

toString in class IdentifiableValueObject<DifferentialExpressionAnalysisResult>

equals

public boolean equals(Object o)

Overrides:

equals in class IdentifiableValueObject<DifferentialExpressionAnalysisResult>

canEqual

protected boolean canEqual(Object other)

Overrides:

canEqual in class IdentifiableValueObject<DifferentialExpressionAnalysisResult>

hashCode

public int hashCode()

Overrides:

hashCode in class IdentifiableValueObject<DifferentialExpressionAnalysisResult>