Uses of Class
ubic.gemma.model.common.description.BibliographicReferenceValueObject
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Uses of BibliographicReferenceValueObject in ubic.gemma.core.annotation.reference
Methods in ubic.gemma.core.annotation.reference that return BibliographicReferenceValueObject Modifier and Type Method Description BibliographicReferenceValueObject
BibliographicReferenceService. findVOByExternalId(String id)
Get a reference by the unqualified external id.BibliographicReferenceValueObject
BibliographicReferenceServiceImpl. findVOByExternalId(String id)
BibliographicReferenceValueObject
BibliographicReferenceServiceImpl. loadValueObject(BibliographicReference entity)
Methods in ubic.gemma.core.annotation.reference that return types with arguments of type BibliographicReferenceValueObject Modifier and Type Method Description List<BibliographicReferenceValueObject>
BibliographicReferenceServiceImpl. loadAllValueObjects()
List<BibliographicReferenceValueObject>
BibliographicReferenceService. search(String query)
List<BibliographicReferenceValueObject>
BibliographicReferenceService. search(SearchSettingsValueObject settings)
List<BibliographicReferenceValueObject>
BibliographicReferenceServiceImpl. search(String query)
List<BibliographicReferenceValueObject>
BibliographicReferenceServiceImpl. search(SearchSettingsValueObject settings)
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Uses of BibliographicReferenceValueObject in ubic.gemma.core.association.phenotype
Methods in ubic.gemma.core.association.phenotype that return BibliographicReferenceValueObject Modifier and Type Method Description BibliographicReferenceValueObject
PhenotypeAssociationManagerService. findBibliographicReference(String pubMedId)
Deprecated.Find all phenotypes associated to a pubmedIDBibliographicReferenceValueObject
PhenotypeAssociationManagerServiceImpl. findBibliographicReference(String pubMedId)
Deprecated. -
Uses of BibliographicReferenceValueObject in ubic.gemma.model.common.description
Methods in ubic.gemma.model.common.description that return types with arguments of type BibliographicReferenceValueObject Modifier and Type Method Description static List<BibliographicReferenceValueObject>
BibliographicReferenceValueObject. convert2ValueObjects(Collection<BibliographicReference> refs)
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Uses of BibliographicReferenceValueObject in ubic.gemma.persistence.service.common.description
Methods in ubic.gemma.persistence.service.common.description that return BibliographicReferenceValueObject Modifier and Type Method Description protected BibliographicReferenceValueObject
BibliographicReferenceDaoImpl. doLoadValueObject(BibliographicReference entity)
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Uses of BibliographicReferenceValueObject in ubic.gemma.web.controller
Methods in ubic.gemma.web.controller that return types with arguments of type BibliographicReferenceValueObject Modifier and Type Method Description Collection<BibliographicReferenceValueObject>
PhenotypeController. findBibliographicReference(String pubMedId, Long evidenceId)
Finds bibliographic reference with the given pubmed id. -
Uses of BibliographicReferenceValueObject in ubic.gemma.web.controller.common.description.bibref
Methods in ubic.gemma.web.controller.common.description.bibref that return BibliographicReferenceValueObject Modifier and Type Method Description BibliographicReferenceValueObject
BibliographicReferenceController. load(Long id)
BibliographicReferenceValueObject
BibliographicReferenceControllerImpl. load(Long id)
BibliographicReferenceValueObject
BibliographicReferenceController. loadFromPubmedID(String pubmedID)
BibliographicReferenceValueObject
BibliographicReferenceControllerImpl. loadFromPubmedID(String pubMedID)
BibliographicReferenceValueObject
BibliographicReferenceController. update(String pubMedId)
BibliographicReferenceValueObject
BibliographicReferenceControllerImpl. update(String pubMedId)
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