Class ExonArrayDataAddIntegrationTest

java.lang.Object

ubic.gemma.core.util.test.BaseTest5

ubic.gemma.core.util.test.BaseIntegrationTest5

ubic.gemma.core.util.test.BaseSpringContextTest5

ubic.gemma.core.loader.expression.geo.AbstractGeoServiceTest5

ubic.gemma.core.loader.expression.ExonArrayDataAddIntegrationTest

@Tag("slow")
@Disabled("These tests are broken and also way too slow to be included in the test suite by default.")
public class ExonArrayDataAddIntegrationTest
extends AbstractGeoServiceTest5

Uses the Affy Power Tools, and full-sized data sets.

Author:

paul

Field Summary

Fields inherited from class BaseSpringContextTest5

arrayDesignPersister, externalDatabaseService, log, persisterHelper, taxonService, testHelper

Constructor Summary

Constructors

Constructor	Description
ExonArrayDataAddIntegrationTest()

Method Summary

Modifier and Type	Method	Description
static void	checkAptIsAvailable()
void	testAddAffyExonArrayDataExpressionExperiment()
void	testAddAffyExonHuman()
void	testAddAffyExonRat()

Methods inherited from class AbstractGeoServiceTest5

getTestFileBasePath, getTestFileBasePath

Methods inherited from class BaseSpringContextTest5

addTestAnalyses, countRowsInTable, deleteFromTables, getJdbcTemplate, getNewTestPersistentCompleteExpressionExperiment, getTaxon, getTestNonPersistentBioSequence, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentBasicExpressionExperiment, getTestPersistentBasicExpressionExperiment, getTestPersistentBibliographicReference, getTestPersistentBioAssay, getTestPersistentBioAssay, getTestPersistentBioMaterial, getTestPersistentBioMaterial, getTestPersistentBioSequence, getTestPersistentBioSequence, getTestPersistentBioSequence2GeneProducts, getTestPersistentBlatResult, getTestPersistentBlatResult, getTestPersistentCompleteExpressionExperiment, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentContact, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentExpressionExperiment, getTestPersistentExpressionExperiment, getTestPersistentGene, getTestPersistentGene, getTestPersistentGeneProduct, getTestPersistentQuantitationType, randomName, resetTestCollectionSize, runAsAdmin, runAsAgent, runAsAnonymous, runAsUser, runAsUser, setTestCollectionSize

Methods inherited from class BaseIntegrationTest5

setUpAuthentication, tearDownSecurityContext

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ExonArrayDataAddIntegrationTest

public ExonArrayDataAddIntegrationTest()

Method Details

checkAptIsAvailable

@BeforeAll
public static void checkAptIsAvailable()

testAddAffyExonArrayDataExpressionExperiment

@Test
public void testAddAffyExonArrayDataExpressionExperiment()
                                                  throws Exception

Throws:

Exception

testAddAffyExonHuman

@Test
public void testAddAffyExonHuman()

testAddAffyExonRat

@Test
public void testAddAffyExonRat()