Class ProcessedExpressionDataVectorServiceTest

java.lang.Object

ubic.gemma.core.util.test.BaseTest5

ubic.gemma.core.util.test.BaseIntegrationTest5

ubic.gemma.core.util.test.BaseSpringContextTest5

ubic.gemma.core.loader.expression.geo.AbstractGeoServiceTest5

ubic.gemma.persistence.service.expression.bioAssayData.ProcessedExpressionDataVectorServiceTest

@ExtendWith(NetworkAvailableExtension.class)
public class ProcessedExpressionDataVectorServiceTest
extends AbstractGeoServiceTest5

Author:

Paul

Field Summary

Fields inherited from class BaseSpringContextTest5

arrayDesignPersister, externalDatabaseService, log, persisterHelper, taxonService, testHelper

Constructor Summary

Constructors

Constructor	Description
ProcessedExpressionDataVectorServiceTest()

Method Summary

Modifier and Type	Method	Description
void	after()
void	testGetProcessedDataMatrices()	Test method for ProcessedExpressionDataVectorService.getProcessedDataArrays(java.util.Collection, java.util.Collection) .
void	testReplaceProcessedDataVectors()

Methods inherited from class AbstractGeoServiceTest5

getTestFileBasePath, getTestFileBasePath

Methods inherited from class BaseSpringContextTest5

addTestAnalyses, countRowsInTable, deleteFromTables, getJdbcTemplate, getNewTestPersistentCompleteExpressionExperiment, getTaxon, getTestNonPersistentBioSequence, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentBasicExpressionExperiment, getTestPersistentBasicExpressionExperiment, getTestPersistentBibliographicReference, getTestPersistentBioAssay, getTestPersistentBioAssay, getTestPersistentBioMaterial, getTestPersistentBioMaterial, getTestPersistentBioSequence, getTestPersistentBioSequence, getTestPersistentBioSequence2GeneProducts, getTestPersistentBlatResult, getTestPersistentBlatResult, getTestPersistentCompleteExpressionExperiment, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentContact, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentExpressionExperiment, getTestPersistentExpressionExperiment, getTestPersistentGene, getTestPersistentGene, getTestPersistentGeneProduct, getTestPersistentQuantitationType, randomName, resetTestCollectionSize, runAsAdmin, runAsAgent, runAsAnonymous, runAsUser, runAsUser, setTestCollectionSize

Methods inherited from class BaseIntegrationTest5

setUpAuthentication, tearDownSecurityContext

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ProcessedExpressionDataVectorServiceTest

public ProcessedExpressionDataVectorServiceTest()

Method Details

after

@AfterEach
public void after()

testReplaceProcessedDataVectors

@Test
public void testReplaceProcessedDataVectors()
                                     throws QuantitationTypeConversionException

Throws:

QuantitationTypeConversionException

testGetProcessedDataMatrices

@Test
@Tag("slow")
@NetworkAvailable(url="https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi")
public void testGetProcessedDataMatrices()
                                  throws Exception

Test method for ProcessedExpressionDataVectorService.getProcessedDataArrays(java.util.Collection, java.util.Collection) .

Throws:

Exception