List of all 16,752 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Carpentier, Kathryn S et al. (2021) MARCO+lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination.; EMBO J, 40: e108966 |
|
GSE174667 |
| Carr, Lucinda G et al. (2007) Identification of candidate genes for alcohol preference by expression profiling of congenic rat strains.; Alcohol Clin Exp Res, 31: 1089-98 |
|
GSE5849 |
| Carraro, Dirce Maria et al. (2013) Comprehensive analysis of BRCA1, BRCA2 and TP53 germline mutation and tumor characterization: a portrait of early-onset breast cancer in Brazil.; PLoS One, 8: e57581 |
|
GSE37126 |
| Carrasco, Daniel R et al. (2007) The differentiation and stress response factor XBP-1 drives multiple myeloma pathogenesis.; Cancer Cell, 11: 349-60 |
|
GSE6980 |
| Carrero, Javier A et al. (2013) Defining the transcriptional and cellular landscape of type 1 diabetes in the NOD mouse.; PLoS One, 8: e59701 |
|
GSE41203 |
| Carretero, Julian et al. (2010) Integrative genomic and proteomic analyses identify targets for Lkb1-deficient metastatic lung tumors.; Cancer Cell, 17: 547-59 |
|
GSE21581 |
| Carrette, Lieselot L G et al. [Unknown date]A mixed modality approach towards Xi reactivation for Rett syndrome and other X-linked disorders.; Proc Natl Acad Sci U S A, 115: E668-E675 |
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GSE97077 |
| Carrillo-Jimenez, Alejandro et al. (2019) TET2 Regulates the Neuroinflammatory Response in Microglia.; Cell Rep, 29: 697-713.e8 |
|
GSE105155 |
| Carrió, Elvira et al. (2015) Deconstruction of DNA methylation patterns during myogenesis reveals specific epigenetic events in the establishment of the skeletal muscle lineage.; Stem Cells, 33: 2025-36 |
|
GSE63136 |
| Carro, Maria Stella et al. (2010) The transcriptional network for mesenchymal transformation of brain tumours.; Nature, 463: 318-25 |
|
GSE19113 GSE19114 |
| Carsana, Emma Veronica et al. (2022) Massive Accumulation of Sphingomyelin Affects the Lysosomal and Mitochondria Compartments and Promotes Apoptosis in Niemann-Pick Disease Type A.; J Mol Neurosci, 72: 1482-1499 |
|
GSE199194 |
| Carson, Ross A et al. (2018) Statins impact primary embryonic mouse neural stem cell survival, cell death, and fate through distinct mechanisms.; PLoS One, 13: e0196387 |
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GSE111945 |
| Carstens, Julienne L et al. (2014) FGFR1-WNT-TGF-? signaling in prostate cancer mouse models recapitulates human reactive stroma.; Cancer Res, 74: 609-20 |
|
GSE41344 |
| Carstensen, Mikkel B et al. (2020) Circadian regulation and molecular role of the Bsx homeobox gene in the adult pineal gland.; J Pineal Res, 68: e12629 |
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GSE142476 |
| Carter, Bradley S et al. (2012) Glucocorticoid treatment of astrocytes results in temporally dynamic transcriptome regulation and astrocyte-enriched mRNA changes in vitro.; Physiol Genomics, 44: 1188-200 |
|
GSE39270 GSE39272 |
| Carter, Daniel R et al. (2015) Therapeutic targeting of the MYC signal by inhibition of histone chaperone FACT in neuroblastoma.; Sci Transl Med, 7: 312ra176 |
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GSE71059 GSE71105 |
| Carter, John H et al. (2007) Redundant role for early growth response transcriptional regulators in thymocyte differentiation and survival.; J Immunol, 178: 6796-805 |
|
GSE5587 |
| Carter, Todd A et al. (2005) Mechanisms of aging in senescence-accelerated mice.; Genome Biol, 6: R48 |
|
GSE6238 |
| Cartwright, Mark J et al. (2010) Aging, depot origin, and preadipocyte gene expression.; J Gerontol A Biol Sci Med Sci, 65: 242-51 |
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GSE6699 |
| Carullo, Nancy V N et al. [Unknown date]Enhancer RNAs predict enhancer-gene regulatory links and are critical for enhancer function in neuronal systems.; Nucleic Acids Res, 48: 9550-9570 |
|
GSE150499 |
| Carvalho, F A et al. (2012) Cytosolic flagellin receptor NLRC4 protects mice against mucosal and systemic challenges.; Mucosal Immunol, 5: 288-98 |
|
GSE34492 |
| Carvalho, Klebea et al. (2022) Modulation of C5a-C5aR1 signaling alters the dynamics of AD progression.; J Neuroinflammation, 19: 178 |
|
GSE197591 |
| Carver, Brett S et al. (2009) Aberrant ERG expression cooperates with loss of PTEN to promote cancer progression in the prostate.; Nat Genet, 41: 619-24 |
|
GSE14595 |
| Casas, Sílvia et al. (2007) Impairment of the ubiquitin-proteasome pathway is a downstream endoplasmic reticulum stress response induced by extracellular human islet amyloid polypeptide and contributes to pancreatic beta-cell apoptosis.; Diabetes, 56: 2284-94 |
|
GSE2253 |
| Casciati, Arianna et al. (2022) Effects of Ultra-Short Pulsed Electric Field Exposure on Glioblastoma Cells.; Int J Mol Sci, 23: [no pages] |
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GSE195506 |
| Casciati, Arianna et al. (2024) Involvement of Mitochondria in the Selective Response to Microsecond Pulsed Electric Fields on Healthy and Cancer Stem Cells in the Brain.; Int J Mol Sci, 25: [no pages] |
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GSE248599 GSE248600 |
| Casella, Gabriel et al. (2019) Transcriptome signature of cellular senescence.; Nucleic Acids Res, 47: 7294-7305 |
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GSE130727 |
| Cases-Cunillera, Silvia et al. (2022) Heterogeneity and excitability of BRAFV600E-induced tumors is determined by Akt/mTOR-signaling state and Trp53-loss.; Neuro Oncol, 24: 741-754 |
|
GSE180721 |
| Casey, Bradford H et al. [Unknown date]Intrinsic DNA binding properties demonstrated for lineage-specifying basic helix-loop-helix transcription factors.; Genome Res, 28: 484-496 |
|
GSE97713 |
| Casey, Theresa et al. (2009) Molecular signatures suggest a major role for stromal cells in development of invasive breast cancer.; Breast Cancer Res Treat, 114: 47-62 |
|
GSE10797 |
| Cashion, Ann K et al. (2011) Collection and storage of human blood and adipose for genomic analysis of clinical samples.; Res Nurs Health, 34: 408-18 |
|
GSE33070 |
| Casimiro, Mathew C et al. (2013) Cyclin D1 determines estrogen signaling in the mammary gland in vivo.; Mol Endocrinol, 27: 1415-28 |
|
GSE48884 |
| Caskey, Marina et al. (2011) Synthetic double-stranded RNA induces innate immune responses similar to a live viral vaccine in humans.; J Exp Med, 208: 2357-66 |
|
GSE32862.1 GSE32862.2 |
| Casoni, Filippo et al. (2020) ZFP423 regulates early patterning and multiciliogenesis in the hindbrain choroid plexus.; Development, 147: [no pages] |
|
GSE160300 |
| Casorelli, I et al. (2006) Identification of a molecular signature for leukemic promyelocytes and their normal counterparts: Focus on DNA repair genes.; Leukemia, 20: 1978-88 |
|
GSE64282 |
| Cassani, Barbara et al. (2009) Integration of retroviral vectors induces minor changes in the transcriptional activity of T cells from ADA-SCID patients treated with gene therapy.; Blood, 114: 3546-56 |
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GSE17354 |
| Cassarino, Maria Francesca et al. (2018) Gene expression profiling in human corticotroph tumours reveals distinct, neuroendocrine profiles.; J Neuroendocrinol, 30: e12628 |
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GSE93825 |
| Casselli, Timothy et al. (2017) MicroRNA and mRNA Transcriptome Profiling in Primary Human Astrocytes Infected with Borrelia burgdorferi.; PLoS One, 12: e0170961 |
|
GSE85143 |
| Casselli, Timothy et al. (2021) A murine model of Lyme disease demonstrates that Borrelia burgdorferi colonizes the dura mater and induces inflammation in the central nervous system.; PLoS Pathog, 17: e1009256 |
|
GSE149287 |
| Casser, E et al. (2019) Differences in blastomere totipotency in 2-cell mouse embryos are a maternal trait mediated by asymmetric mRNA distribution.; Mol Hum Reprod, 25: 729-744 |
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GSE120905 |
| Castanho, Isabel et al. (2020) Transcriptional Signatures of Tau and Amyloid Neuropathology.; Cell Rep, 30: 2040-2054.e5 |
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GSE125957 |
| Castanza, Anthony S et al. (2021) AUTS2 Regulates RNA Metabolism and Dentate Gyrus Development in Mice.; Cereb Cortex, 31: 4808-4824 |
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GSE112792 |
| Castañer, Olga et al. (2013) In vivo transcriptomic profile after a Mediterranean diet in high-cardiovascular risk patients: a randomized controlled trial.; Am J Clin Nutr, 98: 845-53 |
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GSE28358 |
| Casteels, Tamara et al. (2021) An inhibitor-mediated beta-cell dedifferentiation model reveals distinct roles for FoxO1 in glucagon repression and insulin maturation.; Mol Metab, 54: 101329 |
|
GSE184210 |
| Castellan, Martina et al. (2021) Single-cell analyses reveal YAP/TAZ as regulators of stemness and cell plasticity in Glioblastoma.; Nat Cancer, 2: 174-188 |
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GSE133463 |
| Castellano, Esther et al. (2009) Serum-dependent transcriptional networks identify distinct functional roles for H-Ras and N-Ras during initial stages of the cell cycle.; Genome Biol, 10: R123 |
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GSE14829 |
| Castellano, Joseph M et al. [Unknown date]Human umbilical cord plasma proteins revitalize hippocampal function in aged mice.; Nature, 544: 488-492 |
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GSE75416 |
| Castellanos-Martín, Andrés et al. (2015) Unraveling heterogeneous susceptibility and the evolution of breast cancer using a systems biology approach.; Genome Biol, 16: 40 |
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GSE54582 |
| Castelli, Lydia M et al. (2021) SRSF1-dependent inhibition of C9ORF72-repeat RNA nuclear export: genome-wide mechanisms for neuroprotection in amyotrophic lateral sclerosis.; Mol Neurodegener, 16: 53 |
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GSE139900 |
| Castellino, Robert C et al. (2010) Heterozygosity for Pten promotes tumorigenesis in a mouse model of medulloblastoma.; PLoS One, 5: e10849 |
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GSE19059 |
| Castellsagué, Joan et al. (2015) Comprehensive establishment and characterization of orthoxenograft mouse models of malignant peripheral nerve sheath tumors for personalized medicine.; EMBO Mol Med, 7: 608-27 |
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GSE60082 |
| Castelo-Szekely, Violeta et al. [Unknown date]Charting DENR-dependent translation reinitiation uncovers predictive uORF features and links to circadian timekeeping via Clock.; Nucleic Acids Res, 47: 5193-5209 |
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GSE124793 |
| Castillo Cabrera, Johnny et al. (2023) AGC kinase inhibitors regulate STING signaling through SGK-dependent and SGK-independent mechanisms.; Cell Chem Biol, 30: 1601-1616.e6 |
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GSE243816 |
| Castillo, Erika et al. (2017) Comparative profiling of cortical gene expression in Alzheimer's disease patients and mouse models demonstrates a link between amyloidosis and neuroinflammation.; Sci Rep, 7: 17762 |
|
GSE92926 |
| Castillo-González, Julia et al. (2023) Cortistatin deficiency reveals a dysfunctional brain endothelium with impaired gene pathways, exacerbated immune activation, and disrupted barrier integrity.; J Neuroinflammation, 20: 226 |
|
GSE207405 |
| Castranio, Emilie L et al. (2017) Gene co-expression networks identify Trem2 and Tyrobp as major hubs in human APOE expressing mice following traumatic brain injury.; Neurobiol Dis, 105: 1-14 |
|
GSE102014 |
| Castranio, Emilie L et al. [Unknown date]ABCA1 haplodeficiency affects the brain transcriptome following traumatic brain injury in mice expressing human APOE isoforms.; Acta Neuropathol Commun, 6: 69 |
|
GSE117223 |
| Castro, Nadia P et al. (2016) Adaptation of Laser Microdissection Technique for the Study of a Spontaneous Metastatic Mammary Carcinoma Mouse Model by NanoString Technologies.; PLoS One, 11: e0153270 |
|
GSE63627 |
| Castro, Ryan et al. [Unknown date]Specific labeling of synaptic schwann cells reveals unique cellular and molecular features.; Elife, 9: [no pages] |
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GSE152774 |
| Castro, Ryan W et al. (2023) Aging alters mechanisms underlying voluntary movements in spinal motor neurons of mice, primates, and humans.; JCI Insight, 8: [no pages] |
|
GSE226699 |
| Castro-Piedras, Isabel et al. (2020) Identification of Novel MeCP2 Cancer-Associated Target Genes and Post-Translational Modifications.; Front Oncol, 10: 576362 |
|
GSE160150.2 |
| Casulleras, Mireia et al. (2020) Albumin internalizes and inhibits endosomal TLR signaling in leukocytes from patients with decompensated cirrhosis.; Sci Transl Med, 12: [no pages] |
|
GSE146462 |
| Catale, Clarissa et al. (2022) Early Life Social Stress Causes Sex- and Region-Dependent Dopaminergic Changes that Are Prevented by Minocycline.; Mol Neurobiol, 59: 3913-3932 |
|
GSE199136 |
| Catanese, Alberto et al. (2021) Synaptic disruption and CREB-regulated transcription are restored by K+channel blockers in ALS.; EMBO Mol Med, 13: e13131 |
|
GSE168831 |
| Catani, L et al. (2009) Molecular profile of CD34+ stem/progenitor cells according to JAK2V617F mutation status in essential thrombocythemia.; Leukemia, 23: 997-1000 |
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GSE9827 |
| Catela, Catarina et al. (2022) Control of spinal motor neuron terminal differentiation through sustainedHoxc8gene activity.; Elife, 11: [no pages] |
|
GSE174709 |
| Cates, Hannah M et al. [Unknown date]Genome-wide transcriptional profiling of central amygdala and orbitofrontal cortex during incubation of methamphetamine craving.; Neuropsychopharmacology, 43: 2426-2434 |
|
GSE111243 |
| Cates, Kitra et al. (2021) Deconstructing Stepwise Fate Conversion of Human Fibroblasts to Neurons by MicroRNAs.; Cell Stem Cell, 28: 127-140.e9 |
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GSE154365 GSE154363 GSE154360 |
| Cates, Kitra et al. (2025) Fate erasure logic of gene networks underlying direct neuronal conversion of somatic cells by microRNAs.; Cell Rep, 44: 115153 |
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GSE283006 |
| Cathomas, Flurin et al. (2022) Whole blood transcriptional signatures associated with rapid antidepressant response to ketamine in patients with treatment resistant depression.; Transl Psychiatry, 12: 12 |
|
GSE185855 |
| Catoire, Milène et al. (2014) Fatty acid-inducible ANGPTL4 governs lipid metabolic response to exercise.; Proc Natl Acad Sci U S A, 111: E1043-52 |
|
GSE41769 |
| Catta-Preta, Rinaldo et al. (2021) Transcriptional Pathology Evolves over Time in Rat Hippocampus after Lateral Fluid Percussion Traumatic Brain Injury.; Neurotrauma Rep, 2: 512-525 |
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GSE173975 |
| Cattane, Nadia et al. (2015) Altered gene expression in schizophrenia: findings from transcriptional signatures in fibroblasts and blood.; PLoS One, 10: e0116686 |
|
GSE62333 |
| Cattaneo, Elisa et al. (2011) Preinvasive colorectal lesion transcriptomes correlate with endoscopic morphology (polypoid vs. nonpolypoid).; EMBO Mol Med, 3: 334-47 |
|
GSE21962 |
| Caubit, Xavier et al. (2021) Camk2a-CreandTshz3Expression in Mouse Striatal Cholinergic Interneurons: Implications for Autism Spectrum Disorder.; Front Genet, 12: 683959 |
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GSE157658 |
| Caubit, Xavier et al. [Unknown date]TSHZ3 deletion causes an autism syndrome and defects in cortical projection neurons.; Nat Genet, 48: 1359-1369 |
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GSE85512 |
| Cavalier, Alyssa N et al. (2021) Accelerated aging of the brain transcriptome by the common chemotherapeutic doxorubicin.; Exp Gerontol, 152: 111451 |
|
GSE178812 |
| Cavnar, Michael J et al. (2013) KIT oncogene inhibition drives intratumoral macrophage M2 polarization.; J Exp Med, 210: 2873-86 |
|
GSE51697 |
| Ceasrine, Alexis M et al. (2022) Maternal diet disrupts the placenta-brain axis in a sex-specific manner.; Nat Metab, 4: 1732-1745 |
|
GSE188872 |
| Ceballos-Chávez, María et al. (2015) The chromatin Remodeler CHD8 is required for activation of progesterone receptor-dependent enhancers.; PLoS Genet, 11: e1005174 |
|
GSE62257 |
| Ceccarelli, Manuela et al. (2021) Tumor Growth in the High Frequency Medulloblastoma Mouse Model Ptch1+/-/Tis21KOHas a Specific Activation Signature of the PI3K/AKT/mTOR Pathway and Is Counteracted by the PI3K Inhibitor MEN1611.; Front Oncol, 11: 692053 |
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GSE178124 GSE178122 |
| Cecchelli, Romeo et al. (2014) A stable and reproducible human blood-brain barrier model derived from hematopoietic stem cells.; PLoS One, 9: e99733 |
|
GSE45171 |
| Cederquist, Gustav Y et al. (2020) A Multiplex Human Pluripotent Stem Cell Platform Defines Molecular and Functional Subclasses of Autism-Related Genes.; Cell Stem Cell, 27: 35-49.e6 |
|
GSE146760 |
| Cederroth, Christopher R et al. [Unknown date]Circadian Regulation of Cochlear Sensitivity to Noise by Circulating Glucocorticoids.; Curr Biol, 29: 2477-2487.e6 |
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GSE88954 GSE107086 |
| Cejas, Paloma et al. (2021) Subtype heterogeneity and epigenetic convergence in neuroendocrine prostate cancer.; Nat Commun, 12: 5775 |
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GSE156289 |
| Celen, Cemre et al. [Unknown date]Arid1bhaploinsufficient mice reveal neuropsychiatric phenotypes and reversible causes of growth impairment.; Elife, 6: [no pages] |
|
GSE92238 |
| Celik, Hamza et al. (2018) JARID2 Functions as a Tumor Suppressor in Myeloid Neoplasms by Repressing Self-Renewal in Hematopoietic Progenitor Cells.; Cancer Cell, 34: 741-756.e8 |
|
GSE120595 |
| Celikkaya, Hilal et al. (2019) GATA3 Promotes the Neural Progenitor State but Not Neurogenesis in 3D Traumatic Injury Model of Primary Human Cortical Astrocytes.; Front Cell Neurosci, 13: 23 |
|
GSE117907 |
| Cembrowski, Mark S et al. (2016) Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons.; Elife, 5: e14997 |
|
GSE74985 |
| Cembrowski, Mark S et al. (2016) Spatial Gene-Expression Gradients Underlie Prominent Heterogeneity of CA1 Pyramidal Neurons.; Neuron, 89: 351-68 |
|
GSE67403 |
| Cembrowski, Mark S et al. (2018) Dissociable Structural and Functional Hippocampal Outputs via Distinct Subiculum Cell Classes.; Cell, 173: 1280-1292.e18 |
|
GSE100449.1 |