List of all 16,755 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Cobos, Enrique J et al. (2018) Mechanistic Differences in Neuropathic Pain Modalities Revealed by Correlating Behavior with Global Expression Profiling.; Cell Rep, 22: 1301-1312 |
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GSE102721 GSE89224 |
| Cobos, Inma et al. (2007) Dlx transcription factors promote migration through repression of axon and dendrite growth.; Neuron, 54: 873-88 |
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GSE2161 |
| Cocce, Kimberly J et al. (2019) The Lineage Determining Factor GRHL2 Collaborates with FOXA1 to Establish a Targetable Pathway in Endocrine Therapy-Resistant Breast Cancer.; Cell Rep, 29: 889-903.e10 |
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GSE106681 GSE106694 |
| Coccia, Margherita et al. (2022) Subsequent AS01-adjuvanted vaccinations induce similar transcriptional responses in populations with different disease statuses.; PLoS One, 17: e0276505 |
|
GSE197408 |
| Cocco, Mario et al. (2012) In vitro generation of long-lived human plasma cells.; J Immunol, 189: 5773-85 |
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GSE41208 |
| Codega, Paolo et al. (2014) Prospective identification and purification of quiescent adult neural stem cells from their in vivo niche.; Neuron, 82: 545-59 |
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GSE54653 |
| Coffey, Sydney R et al. (2017) Peripheral huntingtin silencing does not ameliorate central signs of disease in the B6.HttQ111/+ mouse model of Huntington's disease.; PLoS One, 12: e0175968 |
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GSE97101 |
| Coffin, Stephanie L et al. (2022) Disruption of the ATXN1-CIC complex reveals the role of additional nuclear ATXN1 interactors in spinocerebellar ataxia type 1.; Neuron, [no vol.]: [no pages] |
|
GSE218283 |
| Cohen, Andrea J et al. (2017) Hotspots of aberrant enhancer activity punctuate the colorectal cancer epigenome.; Nat Commun, 8: 14400 |
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GSE77737 |
| Cohen, David P A et al. (2020) Effects of repetitive Iodine thyroid blocking on the foetal brain and thyroid in rats: a systems biology approach.; Sci Rep, 10: 10839 |
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GSE148280 GSE148253 |
| Cohen, Ezra E W et al. (2009) A feed-forward loop involving protein kinase Calpha and microRNAs regulates tumor cell cycle.; Cancer Res, 69: 65-74 |
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GSE10300 |
| Cohen, Idan et al. (2012) ZNF750 is expressed in differentiated keratinocytes and regulates epidermal late differentiation genes.; PLoS One, 7: e42628 |
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GSE38039 |
| Cohen, Jennifer et al. (2007) Perturbation of gene expression of the chromatin remodeling pathway in premature newborns at risk for bronchopulmonary dysplasia.; Genome Biol, 8: R210 |
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GSE8586 |
| Cohen, Jonathan E et al. (2014) Systematic identification of 3'-UTR regulatory elements in activity-dependent mRNA stability in hippocampal neurons.; Philos Trans R Soc Lond B Biol Sci, 369: [no pages] |
|
GSE55780 |
| Cohen, Joshua L et al. [Unknown date]Differential stress induced c-Fos expression and identification of region-specific miRNA-mRNA networks in the dorsal raphe and amygdala of high-responder/low-responder rats.; Behav Brain Res, 319: 110-123 |
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GSE86936 GSE86893 |
| Cohen, Lorenzo et al. (2012) Depressive symptoms and cortisol rhythmicity predict survival in patients with renal cell carcinoma: role of inflammatory signaling.; PLoS One, 7: e42324 |
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GSE36957 |
| Cohen, Merav et al. (2014) Chronic exposure to TGF?1 regulates myeloid cell inflammatory response in an IRF7-dependent manner.; EMBO J, 33: 2906-21 |
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GSE62698 |
| Cohen, Sonia et al. (2011) Genome-wide activity-dependent MeCP2 phosphorylation regulates nervous system development and function.; Neuron, 72: 72-85 |
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GSE31849 |
| Cohen, Y et al. (2012) Niche-modulated and niche-modulating genes in bone marrow cells.; Blood Cancer J, 2: e97 |
|
GSE36036 |
| Cohen-Kupiec, Rachel et al. (2011) Effects of IKAP/hELP1 deficiency on gene expression in differentiating neuroblastoma cells: implications for familial dysautonomia.; PLoS One, 6: e19147 |
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GSE26458 |
| Cohn, Erin F et al. (2023) Pervasive environmental chemicals impair oligodendrocyte development.; bioRxiv, [no vol.]: [no pages] |
|
GSE244500 |
| Coker, Caitlin R et al. (2022) Minocycline Reduces Hypothalamic Microglia Activation and Improves Metabolic Dysfunction in High Fat Diet-Induced Obese Mice.; Front Physiol, 13: 933706 |
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GSE198437 |
| Colameo, David et al. (2021) Pervasive compartment-specific regulation of gene expression during homeostatic synaptic scaling.; EMBO Rep, 22: e52094 |
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GSE155540 |
| Colantuoni, Carlo et al. (2011) Temporal dynamics and genetic control of transcription in the human prefrontal cortex.; Nature, 478: 519-23 |
|
GSE30272 |
| Colasante, Gaia et al. (2009) Arx acts as a regional key selector gene in the ventral telencephalon mainly through its transcriptional repression activity.; Dev Biol, 334: 59-71 |
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GSE12956 |
| Colasante, Gaia et al. (2015) Rapid Conversion of Fibroblasts into Functional Forebrain GABAergic Interneurons by Direct Genetic Reprogramming.; Cell Stem Cell, 17: 719-734 |
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GSE74065 |
| Colasante, Gaia et al. (2019) dCas9-Based Scn1a Gene Activation Restores Inhibitory Interneuron Excitability and Attenuates Seizures in Dravet Syndrome Mice.; Mol Ther, [no vol.]: [no pages] |
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GSE111436 |
| Coldren, Christopher D et al. (2006) Baseline gene expression predicts sensitivity to gefitinib in non-small cell lung cancer cell lines.; Mol Cancer Res, 4: 521-8 |
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GSE4342 |
| Coldren, Christopher D et al. (2006) Functional and genomic changes induced by alveolar transmigration in human neutrophils.; Am J Physiol Lung Cell Mol Physiol, 291: L1267-76 |
|
GSE2322 |
| Cole, Alexander J et al. (2023) Quiescent Ovarian Cancer Cells Secrete Follistatin to Induce Chemotherapy Resistance in Surrounding Cells in Response to Chemotherapy.; Clin Cancer Res, 29: 1969-1983 |
|
GSE210439 |
| Cole, Kristina A et al. (2011) RNAi screen of the protein kinome identifies checkpoint kinase 1 (CHK1) as a therapeutic target in neuroblastoma.; Proc Natl Acad Sci U S A, 108: 3336-41 |
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GSE19274 |
| Cole, Steve W et al. (2007) Social regulation of gene expression in human leukocytes.; Genome Biol, 8: R189 |
|
GSE7148 |
| Cole, Steven W et al. (2011) Transcript origin analysis identifies antigen-presenting cells as primary targets of socially regulated gene expression in leukocytes.; Proc Natl Acad Sci U S A, 108: 3080-5 |
|
GSE25837 |
| Cole, Toby B et al. (2011) Repeated developmental exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1)-modulated effects on cerebellar gene expression.; Toxicol Sci, 123: 155-69 |
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GSE25250 |
| Cole, Toby B et al. (2014) Repeated gestational exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1) modulated effects in maternal and fetal tissues.; Toxicol Sci, 141: 409-22 |
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GSE58103 |
| Colella, Pasqualina et al. (2020) Gene therapy with secreted acid alpha-glucosidase rescues Pompe disease in a novel mouse model with early-onset spinal cord and respiratory defects.; EBioMedicine, 61: 103052 |
|
GSE156230 |
| Coleman, Daniel J et al. (2016) Cellular androgen content influences enzalutamide agonism of F877L mutant androgen receptor.; Oncotarget, 7: 40690-40703 |
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GSE69896 |
| Coleman, Daniel J et al. (2019) Maintenance of MYC expression promotes de novo resistance to BET bromodomain inhibition in castration-resistant prostate cancer.; Sci Rep, 9: 3823 |
|
GSE98069 |
| Coleman, Daniel J L et al. (2023) Gene regulatory network analysis predicts cooperating transcription factor regulons required for FLT3-ITD+ AML growth.; Cell Rep, 42: 113568 |
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GSE236772 |
| Coles, Garry L et al. (2020) Unbiased Proteomic Profiling Uncovers a Targetable GNAS/PKA/PP2A Axis in Small Cell Lung Cancer Stem Cells.; Cancer Cell, 38: 129-143.e7 |
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GSE126353 |
| Coletta, Dawn K et al. (2008) Effect of acute physiological hyperinsulinemia on gene expression in human skeletal muscle in vivo.; Am J Physiol Endocrinol Metab, 294: E910-7 |
|
GSE9105 |
| Collado, Manuel et al. (2007) Genomic profiling of circulating plasma RNA for the analysis of cancer.; Clin Chem, 53: 1860-3 |
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GSE4988 |
| Collins, Charlotte A et al. (2011) Reprogramming adult dermis to a neonatal state through epidermal activation of ?-catenin.; Development, 138: 5189-99 |
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GSE32966 |
| Collins, James F (2006) Gene chip analyses reveal differential genetic responses to iron deficiency in rat duodenum and jejunum.; Biol Res, 39: 25-37 |
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GSE1892 |
| Collins, James F et al. (2008) Induction of arachidonate 12-lipoxygenase (Alox15) in intestine of iron-deficient rats correlates with the production of biologically active lipid mediators.; Am J Physiol Gastrointest Liver Physiol, [no vol.]: [no pages] |
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GSE7267 |
| Collison, Kate S et al. (2018) Effect of developmental NMDAR antagonism with CGP 39551 on aspartame-induced hypothalamic and adrenal gene expression.; PLoS One, 13: e0194416 |
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GSE108042 GSE100324 GSE100325 |
| Colombo, Jucimara et al. (2009) Gene expression profiling reveals molecular marker candidates of laryngeal squamous cell carcinoma.; Oncol Rep, 21: 649-63 |
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GSE10288 |
| Colombo, Paolo C et al. (2014) Peripheral venous congestion causes inflammation, neurohormonal, and endothelial cell activation.; Eur Heart J, 35: 448-54 |
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GSE38783 |
| Colville, A M et al. [Unknown date]Effects of selection for ethanol preference on gene expression in the nucleus accumbens of HS-CC mice.; Genes Brain Behav, 16: 462-471 |
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GSE65950 |
| Comblain, Fanny et al. (2016) Identification of Targets of a New Nutritional Mixture for Osteoarthritis Management Composed by Curcuminoids Extract, Hydrolyzed Collagen and Green Tea Extract.; PLoS One, 11: e0156902 |
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GSE75181 |
| Comelli, Elena Maria et al. (2009) Biomarkers of human gastrointestinal tract regions.; Mamm Genome, 20: 516-27 |
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GSE10867 |
| Comer, Jason E et al. (2006) Murine macrophage transcriptional and functional responses to Bacillus anthracis edema toxin.; Microb Pathog, 41: 96-110 |
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GSE4712 |
| Comer, Jason E et al. (2010) Transcriptomic and innate immune responses to Yersinia pestis in the lymph node during bubonic plague.; Infect Immun, 78: 5086-98 |
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GSE22299 |
| Comes, Stefania et al. (2013) L-Proline induces a mesenchymal-like invasive program in embryonic stem cells by remodeling H3K9 and H3K36 methylation.; Stem Cell Reports, 1: 307-21 |
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GSE50603 |
| Comfort, Nicole et al. (2023) Longitudinal transcriptomic analysis of mouse sciatic nerve reveals pathways associated with age-related muscle pathology.; J Cachexia Sarcopenia Muscle, 14: 1322-1336 |
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GSE198669 |
| Compagno, Mara et al. (2017) Phosphatidylinositol 3-kinase δ blockade increases genomic instability in B cells.; Nature, 542: 489-493 |
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GSE77788.1 |
| Condamine, Thomas et al. (2016) Lectin-type oxidized LDL receptor-1 distinguishes population of human polymorphonuclear myeloid-derived suppressor cells in cancer patients.; Sci Immunol, 1: [no pages] |
|
GSE79404 |
| Conde-Dusman, María J et al. (2021) Control of protein synthesis and memory by GluN3A-NMDA receptors through inhibition of GIT1/mTORC1 assembly.; Elife, 10: [no pages] |
|
GSE175920 |
| Conedera, Federica Maria et al. (2021) The TGFβ/Notch axis facilitates Müller cell-to-epithelial transition to ultimately form a chronic glial scar.; Mol Neurodegener, 16: 69 |
|
GSE132140 |
| Conenello, Gina M et al. (2011) A single N66S mutation in the PB1-F2 protein of influenza A virus increases virulence by inhibiting the early interferon response in vivo.; J Virol, 85: 652-62 |
|
GSE35940 |
| Conesa-Zamora, Pablo et al. (2013) Expression profiling shows differential molecular pathways and provides potential new diagnostic biomarkers for colorectal serrated adenocarcinoma.; Int J Cancer, 132: 297-307 |
|
GSE36758 |
| Conger, Kelly O et al. (2024) ASCT2 is a major contributor to serine uptake in cancer cells.; Cell Rep, 43: 114552 |
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GSE269606 |
| Conlon, Erin G et al. (2018) Unexpected similarities between C9ORF72 and sporadic forms of ALS/FTD suggest a common disease mechanism.; Elife, 7: [no pages] |
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GSE272626 |
| Conn, Vanessa M et al. [Unknown date]SRRM4 Expands the Repertoire of Circular RNAs by Regulating Microexon Inclusion.; Cells, 9: [no pages] |
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GSE159260 |
| Connelly, Carey E et al. (2012) Pertussis toxin exacerbates and prolongs airway inflammatory responses during Bordetella pertussis infection.; Infect Immun, 80: 4317-32 |
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GSE33995 |
| Connelly, Jon P et al. (2014) Targeted correction of RUNX1 mutation in FPD patient-specific induced pluripotent stem cells rescues megakaryopoietic defects.; Blood, 124: 1926-30 |
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GSE54295 |
| Connolly, Kate et al. (2009) Stable XIAP knockdown clones of HCT116 colon cancer cells are more sensitive to TRAIL, taxanes and irradiation in vitro.; Cancer Chemother Pharmacol, [no vol.]: [no pages] |
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GSE11618 |
| Conrad, Linus J et al. (2024) The upregulation of K+and HCN channels in developing spiral ganglion neurons is mediated by cochlear inner hair cells.; J Physiol, 602: 5329-5351 |
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GSE242669 |
| Conrad, Ryan J et al. (2017) The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin-Remodeling Complexes.; Mol Cell, 67: 1001-1012.e6 |
|
GSE100266 |
| Conrad, Sabine et al. (2008) Generation of pluripotent stem cells from adult human testis.; Nature, 456: 344-9 |
|
GSE11350 |
| Conrad, Thomas et al. (2014) Microprocessor activity controls differential miRNA biogenesis In Vivo.; Cell Rep, 9: 542-54 |
|
GSE56862.2 |
| Constantinides, Michael G et al. (2011) A naive-like population of human CD1d-restricted T cells expressing intermediate levels of promyelocytic leukemia zinc finger.; J Immunol, 187: 309-15 |
|
GSE28726 |
| Constantinides, Michael G et al. (2015) PLZF expression maps the early stages of ILC1 lineage development.; Proc Natl Acad Sci U S A, 112: 5123-8 |
|
GSE65898 |
| Constantinou, Myrianni et al. (2024) Lineage specification in glioblastoma is regulated by METTL7B.; Cell Rep, 43: 114309 |
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GSE242328 |
| Conte, Giorgia et al. (2020) High concordance between hippocampal transcriptome of the mouse intra-amygdala kainic acid model and human temporal lobe epilepsy.; Epilepsia, 61: 2795-2810 |
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GSE122228 |
| Conteduca, Giuseppina et al. (2022) NSD1Mutations in Sotos Syndrome Induce Differential Expression of Long Noncoding RNAs, miR646 and Genes Controlling the G2/M Checkpoint.; Life (Basel), 12: [no pages] |
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GSE204775 |
| Contento, Greg et al. (2024) Pyruvate metabolism dictates fibroblast sensitivity to GLS1 inhibition during fibrogenesis.; JCI Insight, 9: [no pages] |
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GSE244098 |
| Conti, Laura et al. (2013) The noninflammatory role of high mobility group box 1/toll-like receptor 2 axis in the self-renewal of mammary cancer stem cells.; FASEB J, 27: 4731-44 |
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GSE21475 GSE21451 GSE26527 |
| Conti, Sefora et al. (2024) Membrane to cortex attachment determines different mechanical phenotypes in LGR5+ and LGR5- colorectal cancer cells.; Nat Commun, 15: 3363 |
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GSE247359 |
| Conti, Valentina et al. (2021) mTORC1 promotes malignant large cell/anaplastic histology and is a targetable vulnerability in SHH-TP53 mutant medulloblastomas.; JCI Insight, [no vol.]: [no pages] |
|
GSE183901 |
| Conway, Eric et al. (2018) A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities.; Mol Cell, 70: 408-421.e8 |
|
GSE100679 |
| Cooke, Jessica A et al. (2023) Propensity of Patient-Derived iPSCs for Retinal Differentiation: Implications for Autologous Cell Replacement.; Stem Cells Transl Med, 12: 365-378 |
|
GSE192665 |
| Cooks, Tomer et al. (2013) Mutant p53 prolongs NF-?B activation and promotes chronic inflammation and inflammation-associated colorectal cancer.; Cancer Cell, 23: 634-46 |
|
GSE43738 |
| Cool, Bethany H et al. (2010) A flanking gene problem leads to the discovery of a Gprc5b splice variant predominantly expressed in C57Bl/6J mouse brain and in maturing neurons.; PLoS One, 5: e10351 |
|
GSE14274 |
| Cooper, Fay et al. (2022) Rostrocaudal patterning and neural crest differentiation of human pre-neural spinal cord progenitors in vitro.; Stem Cell Reports, 17: 894-910 |
|
GSE150709 |
| Cooper, Kelley N et al. (2024) Limited proteolysis of neutrophil granule proteins by the bacterial protease RgpB depletes neutrophil antimicrobial capacity.; J Leukoc Biol, [no vol.]: [no pages] |
|
GSE279027 |
| Cooper-Knock, Johnathan et al. (2015) C9ORF72 GGGGCC Expanded Repeats Produce Splicing Dysregulation which Correlates with Disease Severity in Amyotrophic Lateral Sclerosis.; PLoS One, 10: e0127376 |
|
GSE68605 |
| Copeland, Jessica N et al. (2011) Notch signaling regulates remodeling and vessel diameter in the extraembryonic yolk sac.; BMC Dev Biol, 11: 12 |
|
GSE22418 |
| Coppiello, Giulia et al. (2015) Meox2/Tcf15 heterodimers program the heart capillary endothelium for cardiac fatty acid uptake.; Circulation, 131: 815-26 |
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GSE48209 |
| Coppin, Hélène et al. (2007) Gene expression profiling of Hfe-/- liver and duodenum in mouse strains with differing susceptibilities to iron loading: identification of transcriptional regulatory targets of Hfe and potential hemochromatosis modifiers.; Genome Biol, 8: R221 |
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GSE7357 |
| Coppola, David M et al. (2012) The effects of unilateral naris occlusion on gene expression profiles in mouse olfactory mucosa.; J Mol Neurosci, 47: 604-18 |
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GSE33833 |
| Coppola, Giovanni et al. (2011) A gene expression phenotype in lymphocytes from Friedreich ataxia patients.; Ann Neurol, 70: 790-804 |
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GSE30933 |