List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Chen, Kok-Siong et al. (2023) Bifunctional cancer cell-based vaccine concomitantly drives direct tumor killing and antitumor immunity.; Sci Transl Med, 15: eabo4778 |
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GSE217253 |
| Chen, Kuey-Chu et al. (2013) Glucocorticoid-dependent hippocampal transcriptome in male rats: pathway-specific alterations with aging.; Endocrinology, 154: 2807-20 |
|
GSE37618 |
| Chen, Lehua et al. (2025) The DNA demethylase TET1 modifies the impact of maternal folic acid status on embryonic brain development.; EMBO Rep, 26: 175-199 |
|
GSE275393 |
| Chen, Lei et al. (2023) High-throughput drug screening identifies fluoxetine as a potential therapeutic agent for neuroendocrine prostate cancer.; Front Oncol, 13: 1085569 |
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GSE224715 |
| Chen, Lei et al. (2023) RBM4 dictates ESCC cell fate switch from cellular senescence to glutamine-addiction survival through inhibiting LKB1-AMPK-axis.; Signal Transduct Target Ther, 8: 159 |
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GSE220613 |
| Chen, Li et al. (2010) Genome-wide analysis of YY2 versus YY1 target genes.; Nucleic Acids Res, 38: 4011-26 |
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GSE14964 |
| Chen, Liang-Fu et al. (2020) The NMDA receptor subunit GluN3A regulates synaptic activity-induced and myocyte enhancer factor 2C (MEF2C)-dependent transcription.; J Biol Chem, 295: 8613-8627 |
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GSE133917 |
| Chen, Lin et al. (2010) Positional differences in the wound transcriptome of skin and oral mucosa.; BMC Genomics, 11: 471 |
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GSE23006 |
| Chen, Lin et al. (2015) MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome.; Proc Natl Acad Sci U S A, 112: 5509-14 |
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GSE66870 |
| Chen, Linfeng et al. (2013) SYK inhibition modulates distinct PI3K/AKT- dependent survival pathways and cholesterol biosynthesis in diffuse large B cell lymphomas.; Cancer Cell, 23: 826-38 |
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GSE34176 |
| Chen, Ling et al. (2021) Pten is a key intrinsic factor regulating raphe 5-HT neuronal plasticity and depressive behaviors in mice.; Transl Psychiatry, 11: 186 |
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GSE164610 |
| Chen, Liying et al. (2018) CRISPR-Cas9 screen reveals a MYCN-amplified neuroblastoma dependency on EZH2.; J Clin Invest, 128: 446-462 |
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GSE85431 |
| Chen, Lu et al. (2014) Human neural precursor cells promote neurologic recovery in a viral model of multiple sclerosis.; Stem Cell Reports, 2: 825-37 |
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GSE56187 |
| Chen, Lu et al. (2023) ANGPTL2 binds MAG to efficiently enhance oligodendrocyte differentiation.; Cell Biosci, 13: 42 |
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GSE199393 |
| Chen, Lunhao et al. (2022) mTOR-neuropeptide Y signaling sensitizes nociceptors to drive neuropathic pain.; JCI Insight, 7: [no pages] |
|
GSE184014 |
| Chen, Mei et al. (2025) Astragaloside IV ameliorates autism-like behaviors in BTBR mice by modulating Camk2n2-dependent OXPHOS and neurotransmission in the mPFC.; J Adv Res, 77: 763-777 |
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GSE271821 |
| Chen, Miaomiao et al. (2023) Endocannabinoid biosynthetic enzymes regulate pain response via LKB1-AMPK signaling.; Proc Natl Acad Sci U S A, 120: e2304900120 |
|
GSE249312 |
| Chen, Ming-Zhen et al. (2022) Extracellular domain of semaphorin 5A serves a tumor‑suppressing role by activating interferon signaling pathways in lung adenocarcinoma cells.; Int J Oncol, 60: [no pages] |
|
GSE157062 |
| Chen, Minghui Jessica et al. (2011) A global transcriptomic view of the multifaceted role of glutathione peroxidase-1 in cerebral ischemic-reperfusion injury.; Free Radic Biol Med, 50: 736-48 |
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GSE23163 |
| Chen, Minghui Jessica et al. (2013) Gene profiling identifies commonalities in neuronal pathways in excitotoxicity: evidence favouring cell cycle re-activation in concert with oxidative stress.; Neurochem Int, 62: 719-30 |
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GSE22994 GSE19936 |
| Chen, Mingtao et al. (2026) Targeting CGRP signaling alleviates cancer-associated pain in oral squamous cell carcinoma.; BMC Oral Health, 26: [no pages] |
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GSE260740 |
| Chen, Muwan et al. (2020) Rapid generation of regionally specified CNS neurons by sequential patterning and conversion of human induced pluripotent stem cells.; Stem Cell Res, 48: 101945 |
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GSE149864 |
| Chen, Nan et al. (2021) Maternal obesity interrupts the coordination of the unfolded protein response and heat shock response in the postnatal developing hypothalamus of male offspring in mice.; Mol Cell Endocrinol, 527: 111218 |
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GSE162744 |
| Chen, Patrick B et al. (2017) Mapping Gene Expression in Excitatory Neurons during Hippocampal Late-Phase Long-Term Potentiation.; Front Mol Neurosci, 10: 39 |
|
GSE79790 |
| Chen, Peiwen et al. (2020) Circadian Regulator CLOCK Recruits Immune-Suppressive Microglia into the GBM Tumor Microenvironment.; Cancer Discov, 10: 371-381 |
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GSE140409 |
| Chen, Pengxiang et al. (2022) Olfactory sensory experience regulates gliomagenesis via neuronal IGF1.; Nature, 606: 550-556 |
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GSE189940 GSE159427 |
| Chen, Ping-Chung et al. (2022) Alzheimer's disease-associated U1 snRNP splicing dysfunction causes neuronal hyperexcitability and cognitive impairment.; Nat Aging, 2: 923-940 |
|
GSE196871 GSE196872 |
| Chen, Qian et al. (2022) LYL1 facilitates AETFC assembly and gene activation by recruiting CARM1 in t(8;21) AML.; Proc Natl Acad Sci U S A, 119: e2213718119 |
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GSE207233 |
| Chen, Quanhai et al. (2010) An association between gene expression and better survival in female mice following myocardial infarction.; J Mol Cell Cardiol, 49: 801-11 |
|
GSE23294 |
| Chen, Renchao et al. (2022) Cell type-specific mechanism of Setd1a heterozygosity in schizophrenia pathogenesis.; Sci Adv, 8: eabm1077 |
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GSE181024 GSE181021.1 GSE181021.2 |
| Chen, Renrui et al. (2024) Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions.; Commun Biol, 7: 752 |
|
GSE240689 |
| Chen, Rui et al. (2023) CircTmeff1 Promotes Muscle Atrophy by Interacting with TDP-43 and Encoding A Novel TMEFF1-339aa Protein.; Adv Sci (Weinh), 10: e2206732 |
|
GSE205537 |
| Chen, Rui et al. (2024) Citrullination modulation stabilizes HIF-1α to promote tumour progression.; Nat Commun, 15: 7654 |
|
GSE233772 |
| Chen, Ruyan et al. (2024) Destabilization of fear memory by Rac1-driven engram-microglia communication in hippocampus.; Brain Behav Immun, 119: 621-636 |
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GSE169019 |
| Chen, Shaoxuan et al. (2021) Temporarily Epigenetic Repression in Bergmann Glia Regulates the Migration of Granule Cells.; Adv Sci (Weinh), 8: 2003164 |
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GSE155871 |
| Chen, Sheng-Wen et al. (2025) ECM29/proteasome-mediated self-antigen generation by CNS-resident neuroglia promotes regulatory T cell activation.; Cell Rep, 44: 115161 |
|
GSE251784 |
| Chen, Shuibing et al. (2021) SARS-CoV-2 Infection Causes Dopaminergic Neuron Senescence.; Res Sq, [no vol.]: [no pages] |
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GSE174745.1 |
| Chen, Shuyi et al. (2013) Defective FGF signaling causes coloboma formation and disrupts retinal neurogenesis.; Cell Res, 23: 254-73 |
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GSE41260 |
| Chen, Siqi et al. (2025) Inhibition of C3/C3aR Pathway Alleviates Visual and Optic Nerve Impairments in a Rat Model of Neuromyelitis Optica Spectrum Disorder.; Eur J Neurosci, 61: e70103 |
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GSE292730 |
| Chen, Sisi et al. (2026) Mutant p53 promotes clonal hematopoiesis by generating a chronic inflammatory microenvironment.; J Clin Invest, 136: [no pages] |
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GSE261632 |
| Chen, Siwei et al. (2020) Metabolomic and transcriptomic signatures of prenatal excessive methionine support nature rather than nurture in schizophrenia pathogenesis.; Commun Biol, 3: 409 |
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GSE153195 |
| Chen, Taige et al. (2025) MSC-encapsulated porous microparticle eye drops for autoimmune dry eye disease treatment in NOD mice.; Sci Adv, 11: eadu9772 |
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GSE295017 |
| Chen, Tian et al. (2015) ADAR1 is required for differentiation and neural induction by regulating microRNA processing in a catalytically independent manner.; Cell Res, 25: 459-76 |
|
GSE56152.2 |
| Chen, Ting et al. (2016) Liver kinase B1 inhibits the expression of inflammation-related genes postcontraction in skeletal muscle.; J Appl Physiol (1985), 120: 876-88 |
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GSE72352 |
| Chen, Ting et al. (2022) Cycloastragenol suppresses M1 and promotes M2 polarization in LPS-stimulated BV-2 cells and ischemic stroke mice.; Int Immunopharmacol, 113: 109290 |
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GSE199399 |
| Chen, Tong et al. (2015) m(6)A RNA methylation is regulated by microRNAs and promotes reprogramming to pluripotency.; Cell Stem Cell, 16: 289-301 |
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GSE52125 |
| Chen, Tzu-Yu et al. (2024) Mature neurons from iPSCs unveil neurodegeneration-related pathways in mucopolysaccharidosis type II: GSK-3β inhibition for therapeutic potential.; Cell Death Dis, 15: 302 |
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GSE202344 |
| Chen, Vincent C et al. (2008) Notch signaling respecifies the hemangioblast to a cardiac fate.; Nat Biotechnol, 26: 1169-78 |
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GSE12425 |
| Chen, Wei-Yang et al. (2021) Transcriptomics identifies STAT3 as a key regulator of hippocampal gene expression and anhedonia during withdrawal from chronic alcohol exposure.; Transl Psychiatry, 11: 298 |
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GSE171051 |
| Chen, Wei-Yi et al. (2013) A TAF4 coactivator function for E proteins that involves enhanced TFIID binding.; Genes Dev, 27: 1596-609 |
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GSE46807 |
| Chen, Weili et al. (2008) Malignant transformation initiated by Mll-AF9: gene dosage and critical target cells.; Cancer Cell, 13: 432-40 |
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GSE10627 |
| Chen, Weirong et al. (2023) SLE Antibody-Secreting Cells Are Characterized by Enhanced Peripheral Maturation and Survival Programs.; Res Sq, [no vol.]: [no pages] |
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GSE235658 |
| Chen, Weiwei et al. (2022) The PLAUR signaling promotes chronic pruritus.; FASEB J, 36: e22368 |
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GSE189333 |
| Chen, Weiyi et al. (2023) Nutrient-sensing AgRP neurons relay control of liver autophagy during energy deprivation.; Cell Metab, 35: 786-806.e13 |
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GSE188472 |
| Chen, Wen et al. (2021) Fetal growth restriction impairs hippocampal neurogenesis and cognition via Tet1 in offspring.; Cell Rep, 37: 109912 |
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GSE143816 |
| Chen, Wen-Kwei et al. (2010) Ca(v)3.2 T-type Ca2+ channel-dependent activation of ERK in paraventricular thalamus modulates acid-induced chronic muscle pain.; J Neurosci, 30: 10360-8 |
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GSE30842 GSE30845 |
| Chen, Wu-Fu et al. (2024) Gene expression profiling and the isocitrate dehydrogenase mutational landscape of temozolomide‑resistant glioblastoma.; Oncol Lett, 28: 378 |
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GSE234762 |
| Chen, Xi et al. (2014) XBP1 promotes triple-negative breast cancer by controlling the HIF1? pathway.; Nature, 508: 103-7 |
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GSE49953 |
| Chen, Xi et al. (2021) Distinct Persistence Fate of Mycobacterium tuberculosis in Various Types of Cells.; mSystems, 6: e0078321 |
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GSE125907.1 GSE125907.2 |
| Chen, Xi et al. (2023) circGLS2 inhibits hepatocellular carcinoma recurrence via regulating hsa-miR-222-3p-PTEN-AKT signaling.; Signal Transduct Target Ther, 8: 67 |
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GSE182593 |
| Chen, Xi et al. (2024) GV-971 prevents severe acute pancreatitis by remodeling the microbiota-metabolic-immune axis.; Nat Commun, 15: 8278 |
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GSE271034 |
| Chen, Xia et al. (2022) Catalytic Subunit of Protein Phosphatase 2A (PP2Ac) Influences the Meiosis Initiation During Spermatocyte Meiosis Prophase I.; Reprod Sci, 29: 3201-3211 |
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GSE181132 |
| Chen, Xiameng et al. (2020) Comparative Transcriptomic Analyses of Developing Melanocortin Neurons Reveal New Regulators for the Anorexigenic Neuron Identity.; J Neurosci, 40: 3165-3177 |
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GSE146816 |
| Chen, Xiang et al. (2021) RHAMMB-mediated bifunctional nanotherapy targeting Bcl-xL and mitochondria for pancreatic neuroendocrine tumor treatment.; Mol Ther Oncolytics, 23: 277-287 |
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GSE200497 |
| Chen, Xiang et al. (2025) Manipulating Zika virus RNA tertiary structure for developing tissue-specific attenuated vaccines.; EMBO Mol Med, 17: 2787-2808 |
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GSE301761 |
| Chen, Xiangjun et al. (2022) pH sensing controls tissue inflammation by modulating cellular metabolism and endo-lysosomal function of immune cells.; Nat Immunol, 23: 1063-1075 |
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GSE182767 |
| Chen, Xianwei et al. (2024) Styxl2 regulates de novo sarcomere assembly by binding to non-muscle myosin IIs and promoting their degradation.; Elife, 12: [no pages] |
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GSE262242 |
| Chen, Xiao-Yu et al. (2021) The m6A Reader YTHDF1 Facilitates the Tumorigenesis and Metastasis of Gastric Cancer via USP14 Translation in an m6A-Dependent Manner.; Front Cell Dev Biol, 9: 647702 |
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GSE166972 |
| Chen, Xiaohui et al. (2025) Repeated lidocaine exposure induces synaptic and cognitive impairment in aged mice by activating microglia and neurotoxic A1 astrocytes.; iScience, 28: 112041 |
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GSE270941 |
| Chen, Xiaoying et al. (2019) The Transcriptional Regulator SnoN Promotes the Proliferation of Cerebellar Granule Neuron Precursors in the Postnatal Mouse Brain.; J Neurosci, 39: 44-62 |
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GSE120279 |
| Chen, Xin et al. (2002) Gene expression patterns in human liver cancers.; Mol Biol Cell, 13: 1929-39 |
|
GSE3500 |
| Chen, Xin Jie et al. (2025) Mitochondrial protein import stress augments α-synuclein aggregation and neural damage independent of bioenergetics.; Res Sq, [no vol.]: [no pages] |
|
GSE236975 |
| Chen, Xingyong et al. (2022) White matter damage as a consequence of vascular dysfunction in a spontaneous mouse model of chronic mild chronic hypoperfusion with eNOS deficiency.; Mol Psychiatry, 27: 4754-4769 |
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GSE207960 GSE207961 |
| Chen, Xinpu et al. (2012) COUP-TFII is a major regulator of cell cycle and Notch signaling pathways.; Mol Endocrinol, 26: 1268-77 |
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GSE33301 |
| Chen, Xinyu et al. (2022) Human striatal organoids derived from pluripotent stem cells recapitulate striatal development and compartments.; PLoS Biol, 20: e3001868 |
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GSE183903.2 |
| Chen, Xinyu et al. (2026) Apolipoprotein C3 Promotes Retinal Angiogenesis via the MYC Pathway in Hypoxia.; Curr Eye Res, [no vol.]: 1-12 |
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GSE283578 |
| Chen, Xiyue et al. (2025) Multiomics analyses reveal that PRMT5 regulates membrane transport and cholesterol synthesis in white adipocytes.; IMetaOmics, 2: [no pages] |
|
GSE290506 |
| Chen, Xuanyu et al. (2023) MicroRNA-375 Is Induced during Astrocyte-to-Neuron Reprogramming and Promotes Survival of Reprogrammed Neurons when Overexpressed.; Cells, 12: [no pages] |
|
GSE214749 |
| Chen, Xue et al. (2024) CARM1 hypermethylates the NuRD chromatin remodeling complex to promote cell cycle gene expression and breast cancer development.; Nucleic Acids Res, 52: 6811-6829 |
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GSE209909 GSE131864 |
| Chen, Xuefen et al. (2012) Requirement for the histone deacetylase Hdac3 for the inflammatory gene expression program in macrophages.; Proc Natl Acad Sci U S A, 109: E2865-74 |
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GSE33162 |
| Chen, Xuelian et al. (2023) Different immunological mechanisms between AQP4 antibody-positive and MOG antibody-positive optic neuritis based on RNA sequencing analysis of whole blood.; Front Immunol, 14: 1095966 |
|
GSE226808 |
| Chen, Xuemei et al. (2018) Phf8 histone demethylase deficiency causes cognitive impairments through the mTOR pathway.; Nat Commun, 9: 114 |
|
GSE107210 |
| Chen, Xueqin et al. (2023) IDH1 mutation impairs antiviral response and potentiates oncolytic virotherapy in glioma.; Nat Commun, 14: 6781 |
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GSE208634 |
| Chen, Xuewen et al. (2023) In vivo protein turnover rates in varying oxygen tensions nominate MYBBP1A as a mediator of the hyperoxia response.; Sci Adv, 9: eadj4884 |
|
GSE234123 |
| Chen, Xueying et al. (2023) BAF45D regulates spinal cord neural stem/progenitor cell fate through the SMAD-PAX6 axis.; Genes Dis, 10: 366-369 |
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GSE164125 |
| Chen, Xuezhen et al. (2026) Trem2 exacerbates ischemic brain injury through Gpnmb in a photothrombotic stroke model.; Proc Natl Acad Sci U S A, 123: e2523148123 |
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GSE280846 |
| Chen, Y G et al. (2013) Temporal induction of immunoregulatory processes coincides with age-dependent resistance to viral-induced type 1 diabetes.; Genes Immun, 14: 387-400 |
|
GSE40497 |
| Chen, Yalei et al. (2022) Identification and validation of the diagnostic signature associated with immune microenvironment of acute kidney injury based on ferroptosis-related genes through integrated bioinformatics analysis and machine learning.; Front Cell Dev Biol, 11: 1210714 |
|
GSE217427 |
| Chen, Yan-Yan et al. (2022) Combination of paeoniflorin and liquiritin alleviates neuropathic pain by lipid metabolism and calcium signaling coordination.; Front Pharmacol, 13: 944386 |
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GSE205906 |
| Chen, Yanan et al. (2025) Integrated stress response inhibition prolongs the lifespan of a Pelizaeus-Merzbacher disease mouse model by increasing oligodendrocyte survival.; Nat Commun, 17: 1285 |
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GSE277705.1 GSE277705.2 |