Class CompositeSequenceMapSummary

java.lang.Object

ubic.gemma.core.analysis.sequence.CompositeSequenceMapSummary

public class CompositeSequenceMapSummary
extends Object

This is a convenience object to hold the results of CompositeSequence mapping results.

Author:

Paul

Field Summary

Fields

Modifier and Type	Field	Description
static final String	HEADER

Constructor Summary

Constructors

Constructor	Description
CompositeSequenceMapSummary(CompositeSequence compositeSequence)

Method Summary

Modifier and Type	Method	Description
Collection<BlatResult>	getBlatResults()
CompositeSequence	getCompositeSequence()
Collection<GeneProduct>	getGeneProducts()
Collection<Gene>	getGenes()
void	setBlatResults(Collection<BlatResult> blatResults)
void	setGeneProducts(Collection<GeneProduct> geneProducts)
void	setGenes(Collection<Gene> genes)
String	toString()

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Details

HEADER

public static final String HEADER

See Also:

• Constant Field Values

Constructor Details

CompositeSequenceMapSummary

public CompositeSequenceMapSummary(CompositeSequence compositeSequence)

Method Details

toString

public String toString()

Overrides:

toString in class Object

getCompositeSequence

public CompositeSequence getCompositeSequence()

getBlatResults

public Collection<BlatResult> getBlatResults()

getGeneProducts

public Collection<GeneProduct> getGeneProducts()

getGenes

public Collection<Gene> getGenes()

setBlatResults

public void setBlatResults(Collection<BlatResult> blatResults)

setGeneProducts

public void setGeneProducts(Collection<GeneProduct> geneProducts)

setGenes

public void setGenes(Collection<Gene> genes)