ArrayDesignParser (Gemma 1.31.4 API)

java.lang.Object
- ubic.gemma.core.loader.util.parser.BasicLineParser<ArrayDesign>
- - ubic.gemma.core.loader.expression.arrayDesign.ArrayDesignParser

All Implemented Interfaces:

LineParser<ArrayDesign>, Parser<ArrayDesign>
```
@Deprecated
public class ArrayDesignParser
extends BasicLineParser<ArrayDesign>
```
Deprecated.
Parse ArrayDesigns from a flat file. This is used to seed the system from our legacy data. (probably not used) Format:
1. Murine Genome U74A Array --- platform name
2. Affymetrix -- Manufacturer name
3. MG-U74A --- short name
4. MOUSE --- taxon
5. 10044 --- advertised number of design elements
6. (Masked) Affymetrix GeneChip expression probe array... --- Description
Author:

keshav

Field Summary
- Fields inherited from class ubic.gemma.core.loader.util.parser.BasicLineParser
  log
- Fields inherited from interface ubic.gemma.core.loader.util.parser.LineParser
  MIN_PARSED_LINES_FOR_UPDATE, PARSE_ALERT_TIME_FREQUENCY_MS
- Fields inherited from interface ubic.gemma.core.loader.util.parser.Parser
  PARSE_ALERT_FREQUENCY

Constructor Summary

Constructors
Constructor Description

ArrayDesignParser()
Deprecated.

Method Summary

All Methods Instance Methods Concrete Methods Deprecated Methods
Modifier and Type	Method	Description
`protected void`	`addResult(ArrayDesign obj)`	Deprecated.
`Collection<ArrayDesign>`	`getResults()`	Deprecated.
`ArrayDesign`	`parseOneLine(String line)`	Deprecated. Handle the parsing of a single line from the input.

Methods inherited from class ubic.gemma.core.loader.util.parser.BasicLineParser
parse, parse, parse

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - ArrayDesignParser
```
public ArrayDesignParser()
```
    Deprecated.
- Method Detail
  - getResults
```
public Collection<ArrayDesign> getResults()
```
    Deprecated.
    
    Specified by:
    
    getResults in interface Parser<ArrayDesign>
    
    Specified by:
    
    getResults in class BasicLineParser<ArrayDesign>
    
    Returns:
    
    the results of the parse.
  - addResult
```
protected void addResult(ArrayDesign obj)
```
    Deprecated.
    
    Specified by:
    
    addResult in class BasicLineParser<ArrayDesign>
  - parseOneLine
```
public ArrayDesign parseOneLine(String line)
```
    Deprecated.
    
    Description copied from interface: LineParser
    
    Handle the parsing of a single line from the input.
    
    Parameters:
    
    line - line to parse
    
    Returns:
    
    parsed object