Uses of Class
ubic.gemma.model.analysis.expression.coexpression.CoexpressionAnalysis

Packages that use CoexpressionAnalysis

Package	Description
ubic.gemma.core.analysis.expression.coexpression.links
ubic.gemma.model.analysis.expression.coexpression
ubic.gemma.persistence.service.analysis.expression.coexpression

Uses of CoexpressionAnalysis in ubic.gemma.core.analysis.expression.coexpression.links

Methods in ubic.gemma.core.analysis.expression.coexpression.links that return CoexpressionAnalysis

Modifier and Type	Method	Description
CoexpressionAnalysis	LinkAnalysis.getAnalysisObj()
CoexpressionAnalysis	LinkAnalysisConfig.toAnalysis()

Methods in ubic.gemma.core.analysis.expression.coexpression.links with parameters of type CoexpressionAnalysis

Modifier and Type	Method	Description
void	LinkAnalysis.setAnalysisObj(CoexpressionAnalysis analysis)

Uses of CoexpressionAnalysis in ubic.gemma.model.analysis.expression.coexpression

Methods in ubic.gemma.model.analysis.expression.coexpression that return CoexpressionAnalysis

Modifier and Type	Method	Description
static CoexpressionAnalysis	CoexpressionAnalysis.Factory.newInstance()

Uses of CoexpressionAnalysis in ubic.gemma.persistence.service.analysis.expression.coexpression

Methods in ubic.gemma.persistence.service.analysis.expression.coexpression that return types with arguments of type CoexpressionAnalysis

Modifier and Type	Method	Description
Collection<CoexpressionAnalysis>	CoexpressionAnalysisDao.findByExperimentAnalyzed(ExpressionExperiment experimentAnalyzed)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisDaoImpl.findByExperimentAnalyzed(ExpressionExperiment experimentAnalyzed)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisService.findByExperimentAnalyzed(ExpressionExperiment experimentAnalyzed)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisServiceImpl.findByExperimentAnalyzed(ExpressionExperiment investigation)
Map<ExpressionExperiment,Collection<CoexpressionAnalysis>>	CoexpressionAnalysisDao.findByExperimentsAnalyzed(Collection<ExpressionExperiment> experimentsAnalyzed)
Map<ExpressionExperiment,Collection<CoexpressionAnalysis>>	CoexpressionAnalysisDaoImpl.findByExperimentsAnalyzed(Collection<ExpressionExperiment> experimentsAnalyzed)
Map<ExpressionExperiment,Collection<CoexpressionAnalysis>>	CoexpressionAnalysisService.findByExperimentsAnalyzed(Collection<ExpressionExperiment> experimentsAnalyzed)
Map<ExpressionExperiment,Collection<CoexpressionAnalysis>>	CoexpressionAnalysisServiceImpl.findByExperimentsAnalyzed(Collection<ExpressionExperiment> investigations)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisDao.findByTaxon(Taxon taxon)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisDaoImpl.findByTaxon(Taxon taxon)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisService.findByTaxon(Taxon taxon)
Collection<CoexpressionAnalysis>	CoexpressionAnalysisServiceImpl.findByTaxon(Taxon taxon)

Methods in ubic.gemma.persistence.service.analysis.expression.coexpression with parameters of type CoexpressionAnalysis

Modifier and Type	Method	Description
void	CoexpressionAnalysisServiceImpl.remove(CoexpressionAnalysis toDelete)

Method parameters in ubic.gemma.persistence.service.analysis.expression.coexpression with type arguments of type CoexpressionAnalysis

Modifier and Type	Method	Description
void	CoexpressionAnalysisServiceImpl.remove(Collection<CoexpressionAnalysis> entities)