Uses of Interface
ubic.gemma.persistence.persister.Persister

Packages that use Persister

Package	Description
ubic.gemma.core.association.phenotype
ubic.gemma.core.loader.association
ubic.gemma.core.loader.expression.arrayDesign
ubic.gemma.core.loader.genome.gene.ncbi
ubic.gemma.core.loader.genome.taxon
ubic.gemma.core.loader.util
ubic.gemma.persistence.persister
ubic.gemma.web.controller.common.description.bibref
ubic.gemma.web.controller.expression.experiment

Uses of Persister in ubic.gemma.core.association.phenotype

Constructors in ubic.gemma.core.association.phenotype with parameters of type Persister

Constructor

Description

PhenotypeAssoManagerServiceHelperImpl(BibliographicReferenceService bibliographicReferenceService, CharacteristicService characteristicService, DatabaseEntryDao databaseEntryDao, ExternalDatabaseService externalDatabaseService, GeneDiffExMetaAnalysisService geneDiffExMetaAnalysisService, GeneService geneService, PhenotypeAssoOntologyHelper ontologyHelper, Persister persisterHelper, PhenotypeAssociationService phenotypeAssociationService, QuantitationTypeService quantitationTypeService)

Deprecated.

Uses of Persister in ubic.gemma.core.loader.association

Methods in ubic.gemma.core.loader.association with parameters of type Persister

Modifier and Type	Method	Description
void	NCBIGene2GOAssociationLoader.setPersisterHelper(Persister persisterHelper)

Uses of Persister in ubic.gemma.core.loader.expression.arrayDesign

Constructors in ubic.gemma.core.loader.expression.arrayDesign with parameters of type Persister

Constructor	Description
ArrayDesignProbeMapperServiceImpl(AnnotationAssociationService annotationAssociationService, ArrayDesignAnnotationService arrayDesignAnnotationService, ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, ProbeMapper probeMapper, BioSequenceService bioSequenceService, BlatResultService blatResultService, CompositeSequenceService compositeSequenceService, ExpressionDataFileService expressionDataFileService, GeneProductService geneProductService, GeneService geneService, Persister persisterHelper, TaskExecutor taskExecutor)
ArrayDesignSequenceAlignmentServiceImpl(ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, BioSequenceService bioSequenceService, Persister persisterHelper)
ArrayDesignSequenceProcessingServiceImpl(ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, BioSequenceService bioSequenceService, ExternalDatabaseService externalDatabaseService, Persister persisterHelper)

Uses of Persister in ubic.gemma.core.loader.genome.gene.ncbi

Methods in ubic.gemma.core.loader.genome.gene.ncbi with parameters of type Persister

Modifier and Type	Method	Description
void	NcbiGeneLoader.setPersisterHelper(Persister persisterHelper)

Constructors in ubic.gemma.core.loader.genome.gene.ncbi with parameters of type Persister

Constructor	Description
NcbiGeneLoader(Persister persisterHelper)

Uses of Persister in ubic.gemma.core.loader.genome.taxon

Methods in ubic.gemma.core.loader.genome.taxon with parameters of type Persister

Modifier and Type	Method	Description
void	TaxonLoader.setPersisterHelper(Persister persisterHelper)

Uses of Persister in ubic.gemma.core.loader.util

Methods in ubic.gemma.core.loader.util with parameters of type Persister

Modifier and Type	Method	Description
static void	ParserAndLoaderTools.loadDatabase(Persister loader, Collection<?> col)	User the loader to persist the collection.

Uses of Persister in ubic.gemma.persistence.persister

Subinterfaces of Persister in ubic.gemma.persistence.persister

Modifier and Type	Interface	Description
interface	PersisterHelper	This interface contains a few extensions to the base Persister interface to handle special cases with ExpressionExperiment.

Classes in ubic.gemma.persistence.persister that implement Persister

Modifier and Type	Class	Description
class	AbstractPersister	Base class for Persister implementations.
class	ArrayDesignPersister	This class handles persisting array designs.
class	CommonPersister	Persister for ubic.gemma.model.common package classes.
class	ExpressionPersister
class	GenomePersister
class	PersisterHelperImpl	A service that knows how to persist Gemma-domain objects.
class	RelationshipPersister	Persist objects like Gene2GOAssociation.

Uses of Persister in ubic.gemma.web.controller.common.description.bibref

Methods in ubic.gemma.web.controller.common.description.bibref with parameters of type Persister

Modifier and Type	Method	Description
void	BibliographicReferenceControllerImpl.setPersisterHelper(Persister persisterHelper)

Uses of Persister in ubic.gemma.web.controller.expression.experiment

Methods in ubic.gemma.web.controller.expression.experiment with parameters of type Persister

Modifier and Type	Method	Description
void	ExpressionExperimentFormController.setPersisterHelper(Persister persisterHelper)