Uses of Class
ubic.gemma.core.util.BuildInfo
Packages that use BuildInfo
Package
Description
This package contains I/O utilities for reading and writing expression data matrices.
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Uses of BuildInfo in ubic.gemma.core.analysis.service
Constructors in ubic.gemma.core.analysis.service with parameters of type BuildInfoModifierConstructorDescriptionCoexpressionWriter
(BuildInfo buildInfo) DiffExAnalysisResultSetWriter
(EntityUrlBuilder entityUrlBuilder, BuildInfo buildInfo) -
Uses of BuildInfo in ubic.gemma.core.datastructure.matrix.io
Methods in ubic.gemma.core.datastructure.matrix.io with parameters of type BuildInfoModifier and TypeMethodDescriptionstatic void
ExpressionDataWriterUtils.appendBaseHeader
(String fileTypeStr, BuildInfo buildInfo, Date timestamp, Writer buf) static void
ExpressionDataWriterUtils.appendBaseHeader
(ExpressionExperiment experiment, String fileTypeStr, String experimentUrl, BuildInfo buildInfo, Date timestamp, Writer buf) Appends base header information (about the experiment) to a file.static void
ExpressionDataWriterUtils.appendBaseHeader
(ExpressionExperiment experiment, QuantitationType quantitationType, Class<? extends DataVector> dataVectorType, String fileTypeStr, String experimentUrl, BuildInfo buildInfo, Date timestamp, Writer buf) Append base header information (about the experiment) to a file with some information about the quantitation type.Constructors in ubic.gemma.core.datastructure.matrix.io with parameters of type BuildInfoModifierConstructorDescriptionExperimentalDesignWriter
(EntityUrlBuilder entityUrlBuilder, BuildInfo buildInfo, boolean autoFlush) MatrixWriter
(EntityUrlBuilder entityUrlBuilder, BuildInfo buildInfo) MeanVarianceWriter
(BuildInfo buildInfo, EntityUrlBuilder entityUrlBuilder) TabularMatrixWriter
(EntityUrlBuilder entityUrlBuilder, BuildInfo buildInfo) -
Uses of BuildInfo in ubic.gemma.core.logging.log4j
Constructors in ubic.gemma.core.logging.log4j with parameters of type BuildInfo -
Uses of BuildInfo in ubic.gemma.core.util
Methods in ubic.gemma.core.util that return BuildInfoModifier and TypeMethodDescriptionstatic BuildInfo
BuildInfo.fromClasspath()
Retrieve build information directly from the classpath.Methods in ubic.gemma.core.util with parameters of type BuildInfoModifier and TypeMethodDescriptionstatic void
TsvUtils.appendBaseHeader
(String what, BuildInfo buildInfo, Date timestamp, Writer buf) Append a base header to a file.static org.apache.commons.csv.CSVFormat.Builder
TsvUtils.getTsvFormatBuilder
(String what, BuildInfo buildInfo, Date timestamp, String... extraHeaderComments) Preconfigure aCSVFormat.Builder
with desirable defaults.o -
Uses of BuildInfo in ubic.gemma.core.visualization
Methods in ubic.gemma.core.visualization with parameters of type BuildInfoModifier and TypeMethodDescriptionstatic void
ChartUtils.writeBufferedImageAsPNG
(OutputStream out, BufferedImage bufferedImage, String title, BuildInfo buildInfo) static void
ChartUtils.writeChartAsPNG
(OutputStream out, org.jfree.chart.JFreeChart chart, int width, int height, String title, BuildInfo buildInfo) -
Uses of BuildInfo in ubic.gemma.rest
Constructors in ubic.gemma.rest with parameters of type BuildInfoModifierConstructorDescriptionApiInfoValueObject
(String msgWelcome, io.swagger.v3.oas.models.OpenAPI openApi, URI apiDocsUrl, URI specUrl, List<ExternalDatabaseValueObject> externalDatabases, BuildInfo buildInfo) -
Uses of BuildInfo in ubic.gemma.rest.providers
Constructors in ubic.gemma.rest.providers with parameters of type BuildInfoModifierConstructorDescriptionprotected
AbstractExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) AccessDeniedExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) AuthenticationExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) MalformedArgExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) NotFoundExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) UnhandledExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) WebApplicationExceptionMapper
(String hostUrl, io.swagger.v3.oas.models.OpenAPI spec, BuildInfo buildInfo) -
Uses of BuildInfo in ubic.gemma.rest.security
Constructors in ubic.gemma.rest.security with parameters of type BuildInfoModifierConstructorDescriptionRestAuthEntryPoint
(com.fasterxml.jackson.databind.ObjectMapper objectMapper, io.swagger.v3.oas.models.OpenAPI openAPI, BuildInfo buildInfo) -
Uses of BuildInfo in ubic.gemma.rest.util
Methods in ubic.gemma.rest.util with parameters of type BuildInfo -
Uses of BuildInfo in ubic.gemma.web.taglib.expression.experiment
Methods in ubic.gemma.web.taglib.expression.experiment that return BuildInfo