Uses of Class
ubic.gemma.model.analysis.expression.ExpressionAnalysis

Packages that use ExpressionAnalysis

Package	Description
ubic.gemma.model.analysis
ubic.gemma.model.analysis.expression.coexpression
ubic.gemma.model.analysis.expression.diff
ubic.gemma.model.analysis.expression.pca

Uses of ExpressionAnalysis in ubic.gemma.model.analysis

Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis

Modifier and Type	Class	Description
class	SingleExperimentAnalysis<T extends BioAssaySet>	An analysis of a single experiment or subset.

Uses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.coexpression

Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.coexpression

Modifier and Type	Class	Description
class	CoexpressionAnalysis	A coexpression analysis of one experiment.
class	SampleCoexpressionAnalysis	The 'analysis' in the name is a bit of a stretch here, as this object servers purely as an aggregator of all the sample coexpression matrices.

Uses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.diff

Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.diff

Modifier and Type	Class	Description
class	DifferentialExpressionAnalysis	An analysis of changes in expression levels across experimental conditions
class	GeneDifferentialExpressionMetaAnalysis	Represents an analysis that combines the results of other analyses of differential expression.

Uses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.pca

Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.pca

Modifier and Type	Class	Description
class	PrincipalComponentAnalysis