Uses of Class
ubic.gemma.model.analysis.expression.ExpressionAnalysis
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Uses of ExpressionAnalysis in ubic.gemma.model.analysis
Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis Modifier and Type Class Description class
SingleExperimentAnalysis
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Uses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.coexpression
Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.coexpression Modifier and Type Class Description class
CoexpressionAnalysis
A coexpression analysis of one experiment.class
SampleCoexpressionAnalysis
The 'analysis' in the name is a bit of a stretch here, as this object servers purely as an aggregator of all the sample coexpression matrices. -
Uses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.diff
Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.diff Modifier and Type Class Description class
DifferentialExpressionAnalysis
An analysis of changes in expression levels across experimental conditionsclass
GeneDifferentialExpressionMetaAnalysis
Represents an analysis that combines the results of other analyses of differential expression. -
Uses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.pca
Subclasses of ExpressionAnalysis in ubic.gemma.model.analysis.expression.pca Modifier and Type Class Description class
PrincipalComponentAnalysis
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