Uses of Class
ubic.gemma.core.analysis.preprocess.batcheffects.BatchConfound
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Packages that use BatchConfound Package Description ubic.gemma.core.analysis.preprocess.batcheffects ubic.gemma.rest -
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Uses of BatchConfound in ubic.gemma.core.analysis.preprocess.batcheffects
Methods in ubic.gemma.core.analysis.preprocess.batcheffects that return types with arguments of type BatchConfound Modifier and Type Method Description List<BatchConfound>ExpressionExperimentBatchInformationService. getSignificantBatchConfounds(ExpressionExperiment ee)Obtain the significant batch confounds for a dataset.List<BatchConfound>ExpressionExperimentBatchInformationServiceImpl. getSignificantBatchConfounds(ExpressionExperiment ee)Map<ExpressionExperimentSubSet,List<BatchConfound>>ExpressionExperimentBatchInformationService. getSignificantBatchConfoundsForSubsets(ExpressionExperiment ee)Obtain the significant batch confounds for a dataset subsets.Map<ExpressionExperimentSubSet,List<BatchConfound>>ExpressionExperimentBatchInformationServiceImpl. getSignificantBatchConfoundsForSubsets(ExpressionExperiment ee)static Collection<BatchConfound>BatchConfoundUtils. test(BioAssaySet ee) -
Uses of BatchConfound in ubic.gemma.rest
Constructors in ubic.gemma.rest with parameters of type BatchConfound Constructor Description BatchConfoundValueObject(BatchConfound batchConfound)Constructor parameters in ubic.gemma.rest with type arguments of type BatchConfound Constructor Description BatchInformationValueObject(BatchEffectType batchEffectType, BatchEffectDetails batchEffectDetails, List<BatchConfound> batchConfound, Map<ExpressionExperimentSubSet,List<BatchConfound>> subsetBatchConfounds)BatchInformationValueObject(BatchEffectType batchEffectType, BatchEffectDetails batchEffectDetails, List<BatchConfound> batchConfound, Map<ExpressionExperimentSubSet,List<BatchConfound>> subsetBatchConfounds)
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