Uses of Class
ubic.gemma.model.analysis.Analysis
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Uses of Analysis in ubic.gemma.model.analysis
Classes in ubic.gemma.model.analysis with type parameters of type Analysis Modifier and Type Class Description class
AnalysisValueObject<T extends Analysis>
Subclasses of Analysis in ubic.gemma.model.analysis Modifier and Type Class Description class
SingleExperimentAnalysis
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Uses of Analysis in ubic.gemma.model.analysis.expression
Subclasses of Analysis in ubic.gemma.model.analysis.expression Modifier and Type Class Description class
ExpressionAnalysis
An analysis of one or more ExpressionExperiments -
Uses of Analysis in ubic.gemma.model.analysis.expression.coexpression
Subclasses of Analysis in ubic.gemma.model.analysis.expression.coexpression Modifier and Type Class Description class
CoexpressionAnalysis
A coexpression analysis of one experiment.class
SampleCoexpressionAnalysis
The 'analysis' in the name is a bit of a stretch here, as this object servers purely as an aggregator of all the sample coexpression matrices. -
Uses of Analysis in ubic.gemma.model.analysis.expression.diff
Subclasses of Analysis in ubic.gemma.model.analysis.expression.diff Modifier and Type Class Description class
DifferentialExpressionAnalysis
An analysis of changes in expression levels across experimental conditionsclass
GeneDifferentialExpressionMetaAnalysis
Represents an analysis that combines the results of other analyses of differential expression. -
Uses of Analysis in ubic.gemma.model.analysis.expression.pca
Subclasses of Analysis in ubic.gemma.model.analysis.expression.pca Modifier and Type Class Description class
PrincipalComponentAnalysis
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Uses of Analysis in ubic.gemma.model.association
Methods in ubic.gemma.model.association that return Analysis Modifier and Type Method Description Analysis
BioSequence2GeneProduct. getSourceAnalysis()
Methods in ubic.gemma.model.association with parameters of type Analysis Modifier and Type Method Description void
BioSequence2GeneProduct. setSourceAnalysis(Analysis sourceAnalysis)
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Uses of Analysis in ubic.gemma.persistence.service.analysis
Classes in ubic.gemma.persistence.service.analysis with type parameters of type Analysis Modifier and Type Interface Description interface
AnalysisService<T extends Analysis>
Provides basic services for dealing with analyses
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