Uses of Class
ubic.gemma.model.analysis.Analysis
Packages that use Analysis
Package
Description
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Uses of Analysis in ubic.gemma.model.analysis
Classes in ubic.gemma.model.analysis with type parameters of type AnalysisSubclasses of Analysis in ubic.gemma.model.analysisModifier and TypeClassDescriptionclassSingleExperimentAnalysis<T extends BioAssaySet>An analysis of a single experiment or subset. -
Uses of Analysis in ubic.gemma.model.analysis.expression
Subclasses of Analysis in ubic.gemma.model.analysis.expressionModifier and TypeClassDescriptionclassAn analysis of one or more ExpressionExperiments -
Uses of Analysis in ubic.gemma.model.analysis.expression.coexpression
Subclasses of Analysis in ubic.gemma.model.analysis.expression.coexpressionModifier and TypeClassDescriptionclassA coexpression analysis of one experiment.classThe 'analysis' in the name is a bit of a stretch here, as this object servers purely as an aggregator of all the sample coexpression matrices. -
Uses of Analysis in ubic.gemma.model.analysis.expression.diff
Subclasses of Analysis in ubic.gemma.model.analysis.expression.diffModifier and TypeClassDescriptionclassAn analysis of changes in expression levels across experimental conditionsclassRepresents an analysis that combines the results of other analyses of differential expression. -
Uses of Analysis in ubic.gemma.model.analysis.expression.pca
Subclasses of Analysis in ubic.gemma.model.analysis.expression.pca -
Uses of Analysis in ubic.gemma.model.association
Methods in ubic.gemma.model.association that return AnalysisMethods in ubic.gemma.model.association with parameters of type AnalysisModifier and TypeMethodDescriptionvoidBioSequence2GeneProduct.setSourceAnalysis(Analysis sourceAnalysis) -
Uses of Analysis in ubic.gemma.model.expression.bioAssayData
Subclasses of Analysis in ubic.gemma.model.expression.bioAssayDataModifier and TypeClassDescriptionclassRepresents a cell type assignment where cells from a given dataset are assigned cell types. -
Uses of Analysis in ubic.gemma.persistence.service.analysis
Classes in ubic.gemma.persistence.service.analysis with type parameters of type AnalysisModifier and TypeInterfaceDescriptioninterfaceAnalysisDao<T extends Analysis>interfaceAnalysisService<T extends Analysis>Provides basic services for dealing with analyses