Uses of Class
ubic.gemma.model.analysis.expression.pca.ProbeLoading

Packages that use ProbeLoading

Package	Description
ubic.gemma.core.analysis.preprocess.svd
ubic.gemma.model.analysis.expression.pca
ubic.gemma.persistence.service.analysis.expression.pca
ubic.gemma.rest

Uses of ProbeLoading in ubic.gemma.core.analysis.preprocess.svd

Methods in ubic.gemma.core.analysis.preprocess.svd that return types with arguments of type ProbeLoading

Modifier and Type	Method	Description
Map<ProbeLoading, DoubleVectorValueObject>	SVDService.getTopLoadedVectors(ExpressionExperiment ee, int component, int count)
Map<ProbeLoading, DoubleVectorValueObject>	SVDServiceImpl.getTopLoadedVectors(ExpressionExperiment ee, int component, int count)

Uses of ProbeLoading in ubic.gemma.model.analysis.expression.pca

Methods in ubic.gemma.model.analysis.expression.pca that return ProbeLoading

Modifier and Type	Method	Description
static ProbeLoading	ProbeLoading.Factory.newInstance(Integer componentNumber, Double loading, Integer loadingRank, CompositeSequence probe)

Methods in ubic.gemma.model.analysis.expression.pca that return types with arguments of type ProbeLoading

Modifier and Type	Method	Description
Set<ProbeLoading>	PrincipalComponentAnalysis.getProbeLoadings()

Method parameters in ubic.gemma.model.analysis.expression.pca with type arguments of type ProbeLoading

Modifier and Type	Method	Description
void	PrincipalComponentAnalysis.setProbeLoadings(Set<ProbeLoading> probeLoadings)

Uses of ProbeLoading in ubic.gemma.persistence.service.analysis.expression.pca

Methods in ubic.gemma.persistence.service.analysis.expression.pca that return types with arguments of type ProbeLoading

Modifier and Type	Method	Description
List<ProbeLoading>	PrincipalComponentAnalysisDao.getTopLoadedProbes(ExpressionExperiment ee, int component, int count)
List<ProbeLoading>	PrincipalComponentAnalysisDaoImpl.getTopLoadedProbes(ExpressionExperiment ee, int component, int count)
List<ProbeLoading>	PrincipalComponentAnalysisReadService.getTopLoadedProbes(ExpressionExperiment ee, int component, int count)
List<ProbeLoading>	PrincipalComponentAnalysisReadServiceImpl.getTopLoadedProbes(ExpressionExperiment ee, int component, int count)
List<ProbeLoading>	PrincipalComponentAnalysisService.getTopLoadedProbes(ExpressionExperiment ee, int component, int count)
List<ProbeLoading>	PrincipalComponentAnalysisServiceImpl.getTopLoadedProbes(ExpressionExperiment ee, int component, int count)

Uses of ProbeLoading in ubic.gemma.rest

Method parameters in ubic.gemma.rest with type arguments of type ProbeLoading

Modifier and Type	Method	Description
static DatasetsWebService.PcLoadingsValueObject	DatasetsWebService.PcLoadingsValueObject.from(int pc, int top, DatasetsWebService.PcLoadingDirection direction, Map<ProbeLoading, DoubleVectorValueObject> loaded, SVDResult svd, Function<Collection<Long>, Map<Long,Gene>> geneResolver)