Uses of Package
ubic.gemma.model.genome.sequenceAnalysis

Packages that use ubic.gemma.model.genome.sequenceAnalysis

Package	Description
ubic.gemma.core.analysis.sequence
ubic.gemma.core.goldenpath
ubic.gemma.core.loader.expression.arrayDesign
ubic.gemma.core.loader.genome
ubic.gemma.model.analysis.sequence
ubic.gemma.model.association
ubic.gemma.model.genome.sequenceAnalysis
ubic.gemma.persistence.service.expression.arrayDesign
ubic.gemma.persistence.service.genome.biosequence
ubic.gemma.persistence.service.genome.sequenceAnalysis

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.analysis.sequence

Class	Description
BlatAssociation
BlatResult	Represents the result of a BLAT search.
BlatResultValueObject

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.goldenpath

Class	Description
BlatAssociation
BlatResult	Represents the result of a BLAT search.
ThreePrimeDistanceMethod

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.loader.expression.arrayDesign

Class	Description
BlatAssociation
BlatResult	Represents the result of a BLAT search.

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.loader.genome

Class	Description
BlatResult	Represents the result of a BLAT search.

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.model.analysis.sequence

Class	Description
BlatResultValueObject

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.model.association

Class	Description
ThreePrimeDistanceMethod

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.model.genome.sequenceAnalysis

Class	Description
AnnotationAssociation	An association between BioSequence and GeneProduct that is provided through an external annotation source, rather than our own sequence analysis.
BioSequenceValueObject
BlatAssociation
BlatResult	Represents the result of a BLAT search.
SequenceSimilaritySearchResult
SequenceTypeValueObject
ThreePrimeDistanceMethod

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.persistence.service.expression.arrayDesign

Class	Description
BlatResult	Represents the result of a BLAT search.

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.persistence.service.genome.biosequence

Class	Description
BioSequenceValueObject

Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.persistence.service.genome.sequenceAnalysis

Class	Description
AnnotationAssociation	An association between BioSequence and GeneProduct that is provided through an external annotation source, rather than our own sequence analysis.
BlatAssociation
BlatResult	Represents the result of a BLAT search.
BlatResultValueObject