Uses of Package
ubic.gemma.model.genome.sequenceAnalysis
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Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.analysis.sequence Class Description BlatAssociation BlatResult Represents the result of a BLAT search.BlatResultValueObject -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.goldenpath Class Description BlatAssociation BlatResult Represents the result of a BLAT search.ThreePrimeDistanceMethod -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.loader.expression.arrayDesign Class Description BlatAssociation BlatResult Represents the result of a BLAT search. -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.core.loader.genome Class Description BlatResult Represents the result of a BLAT search. -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.model.association Class Description ThreePrimeDistanceMethod -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.model.genome.sequenceAnalysis Class Description AnnotationAssociation An association between BioSequence and GeneProduct that is provided through an external annotation source, rather than our own sequence analysis.BioSequenceValueObject BlatAssociation BlatResult Represents the result of a BLAT search.SequenceSimilaritySearchResult SequenceTypeValueObject ThreePrimeDistanceMethod -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.persistence.service.expression.arrayDesign Class Description BlatResult Represents the result of a BLAT search. -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.persistence.service.genome.biosequence Class Description BioSequenceValueObject -
Classes in ubic.gemma.model.genome.sequenceAnalysis used by ubic.gemma.persistence.service.genome.sequenceAnalysis Class Description AnnotationAssociation An association between BioSequence and GeneProduct that is provided through an external annotation source, rather than our own sequence analysis.BlatAssociation BlatResult Represents the result of a BLAT search.BlatResultValueObject