Uses of Interface
ubic.gemma.core.job.Task

Packages that use Task

Package	Description
ubic.gemma.core.job	Provides functionalities for running background tasks.
ubic.gemma.core.tasks.analysis.coexp
ubic.gemma.core.tasks.analysis.diffex
ubic.gemma.core.tasks.analysis.expression
ubic.gemma.core.tasks.analysis.sequence
ubic.gemma.core.tasks.maintenance
ubic.gemma.core.tasks.visualization
ubic.gemma.web.controller.expression.experiment

Uses of Task in ubic.gemma.core.job

Classes in ubic.gemma.core.job that implement Task

Modifier and Type	Class	Description
class	AbstractTask<C extends TaskCommand>

Methods in ubic.gemma.core.job with type parameters of type Task

Modifier and Type	Method	Description
<T extends Task<?>> String	TaskRunningService.submitTask(T task)
<T extends Task<?>> String	TaskRunningServiceImpl.submitTask(T task)

Methods in ubic.gemma.core.job that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<?>>	TaskCommand.getTaskClass()	Obtain the class of the Task object that will be run for this command.

Uses of Task in ubic.gemma.core.tasks.analysis.coexp

Classes in ubic.gemma.core.tasks.analysis.coexp that implement Task

Modifier and Type	Class	Description
class	LinkAnalysisTaskImpl

Methods in ubic.gemma.core.tasks.analysis.coexp that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	LinkAnalysisTaskCommand.getTaskClass()

Uses of Task in ubic.gemma.core.tasks.analysis.diffex

Subinterfaces of Task in ubic.gemma.core.tasks.analysis.diffex

Modifier and Type	Interface	Description
interface	DifferentialExpressionAnalysisTask
interface	DiffExMetaAnalyzerTask

Classes in ubic.gemma.core.tasks.analysis.diffex that implement Task

Modifier and Type	Class	Description
class	DifferentialExpressionAnalysisTaskImpl	A differential expression analysis spaces task
class	DiffExMetaAnalyzerTaskImpl	A differential expression meta-analysis space task

Methods in ubic.gemma.core.tasks.analysis.diffex that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	DifferentialExpressionAnalysisTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	DiffExMetaAnalyzerTaskCommand.getTaskClass()

Uses of Task in ubic.gemma.core.tasks.analysis.expression

Subinterfaces of Task in ubic.gemma.core.tasks.analysis.expression

Modifier and Type	Interface	Description
interface	BatchInfoFetchTask
interface	BioAssayOutlierProcessingTask
interface	ExpressionExperimentLoadTask
interface	PreprocessExperimentTask	A "processed expression data vector create" task
interface	SvdTask

Classes in ubic.gemma.core.tasks.analysis.expression that implement Task

Modifier and Type	Class	Description
class	BatchInfoFetchTaskImpl	Task to try to get 'batch' information about an experiment.
class	BioAssayOutlierProcessingTaskImpl	Handle 'flagging' a sample as an outlier.
class	ExpressionExperimentLoadTaskImpl
class	PreprocessTaskImpl
class	SvdTaskImpl
class	TwoChannelMissingValueTaskImpl	Space task for computing two channel missing values.

Methods in ubic.gemma.core.tasks.analysis.expression that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	BatchInfoFetchTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	BioAssayOutlierProcessingTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	ExpressionExperimentLoadTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	PreprocessTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	SvdTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	TwoChannelMissingValueTaskCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	UpdateEEDetailsCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	UpdatePubMedCommand.getTaskClass()

Uses of Task in ubic.gemma.core.tasks.analysis.sequence

Subinterfaces of Task in ubic.gemma.core.tasks.analysis.sequence

Modifier and Type	Interface	Description
interface	ArrayDesignProbeMapperTask
interface	ArrayDesignRepeatScanTask

Classes in ubic.gemma.core.tasks.analysis.sequence that implement Task

Modifier and Type	Class	Description
class	ArrayDesignProbeMapperTaskImpl	A probe mapper spaces task .
class	ArrayDesignRepeatScanTaskImpl	An array design repeat scan spaces task

Methods in ubic.gemma.core.tasks.analysis.sequence that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	ArrayDesignRepeatScanTaskCommand.getTaskClass()

Uses of Task in ubic.gemma.core.tasks.maintenance

Subinterfaces of Task in ubic.gemma.core.tasks.maintenance

Modifier and Type	Interface	Description
interface	CharacteristicUpdateTask
interface	ExpressionExperimentReportTask	Handles delegation of report generation (to the space, or run locally)
interface	IndexerTask	Created with IntelliJ IDEA.

Classes in ubic.gemma.core.tasks.maintenance that implement Task

Modifier and Type	Class	Description
class	CharacteristicUpdateTaskImpl	This handles characteristic updates from the client: experiment tags, characteristic browser
class	ExpressionExperimentReportTaskImpl
class	IndexerTaskImpl

Methods in ubic.gemma.core.tasks.maintenance that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	CharacteristicUpdateCommand.getTaskClass()
Class<? extends Task<? extends TaskCommand>>	ExpressionExperimentReportTaskCommand.getTaskClass()
Class<? extends Task<?>>	IndexerTaskCommand.getTaskClass()

Uses of Task in ubic.gemma.core.tasks.visualization

Subinterfaces of Task in ubic.gemma.core.tasks.visualization

Modifier and Type	Interface	Description
interface	DifferentialExpressionSearchTask	Created with IntelliJ IDEA.

Classes in ubic.gemma.core.tasks.visualization that implement Task

Modifier and Type	Class	Description
class	DifferentialExpressionSearchTaskImpl	Encapsulates the search for differential expression results, for a set of genes and experiments (which can be grouped)

Methods in ubic.gemma.core.tasks.visualization that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	DifferentialExpressionSearchTaskCommand.getTaskClass()

Uses of Task in ubic.gemma.web.controller.expression.experiment

Methods in ubic.gemma.web.controller.expression.experiment that return types with arguments of type Task

Modifier and Type	Method	Description
Class<? extends Task<?>>	SimpleExpressionExperimentLoadTaskCommand.getTaskClass()