Uses of Package
ubic.gemma.model.analysis

Packages that use ubic.gemma.model.analysis

Package	Description
ubic.gemma.model.analysis
ubic.gemma.model.analysis.expression
ubic.gemma.model.analysis.expression.coexpression
ubic.gemma.model.analysis.expression.diff
ubic.gemma.model.analysis.expression.pca
ubic.gemma.model.association
ubic.gemma.model.expression.bioAssayData
ubic.gemma.model.expression.experiment
ubic.gemma.persistence.service.analysis
ubic.gemma.rest

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.analysis

Class	Description
Analysis	An analysis of one or more Investigations.
AnalysisResult	Abstract class representing a single result from an Analysis and a typical part of an AnalysisResultSet.
AnalysisResultSet	An abstract class representing a related set of generic analysis results, part of an analysis.
AnalysisResultValueObject	Wraps an AnalysisResult to expose it on the public API.
AnalysisValueObject
ProtocolValueObject

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.analysis.expression

Class	Description
Analysis	An analysis of one or more Investigations.
AnalysisResult	Abstract class representing a single result from an Analysis and a typical part of an AnalysisResultSet.
AnalysisResultSet	An abstract class representing a related set of generic analysis results, part of an analysis.

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.analysis.expression.coexpression

Class	Description
Analysis	An analysis of one or more Investigations.
SingleExperimentAnalysis	An analysis of a single experiment or subset.

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.analysis.expression.diff

Class	Description
Analysis	An analysis of one or more Investigations.
AnalysisResult	Abstract class representing a single result from an Analysis and a typical part of an AnalysisResultSet.
AnalysisResultSet	An abstract class representing a related set of generic analysis results, part of an analysis.
AnalysisResultSetValueObject	Exposes an AnalysisResultSet to the public API.
AnalysisResultValueObject	Wraps an AnalysisResult to expose it on the public API.
AnalysisValueObject
SingleExperimentAnalysis	An analysis of a single experiment or subset.

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.analysis.expression.pca

Class	Description
Analysis	An analysis of one or more Investigations.
SingleExperimentAnalysis	An analysis of a single experiment or subset.

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.association

Class	Description
Analysis	An analysis of one or more Investigations.

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.expression.bioAssayData

Class	Description
Analysis	An analysis of one or more Investigations.
CellTypeAssignmentValueObject

Classes in ubic.gemma.model.analysis used by ubic.gemma.model.expression.experiment

Class	Description
Investigation	An abstract concept of a scientific study

Classes in ubic.gemma.model.analysis used by ubic.gemma.persistence.service.analysis

Class	Description
Analysis	An analysis of one or more Investigations.
AnalysisResult	Abstract class representing a single result from an Analysis and a typical part of an AnalysisResultSet.
AnalysisResultSet	An abstract class representing a related set of generic analysis results, part of an analysis.

Classes in ubic.gemma.model.analysis used by ubic.gemma.rest

Class	Description
AnalysisResultValueObject	Wraps an AnalysisResult to expose it on the public API.
CellTypeAssignmentValueObject