Uses of Interface
ubic.gemma.persistence.service.expression.arrayDesign.ArrayDesignService

Packages that use ArrayDesignService

Package	Description
ubic.gemma.apps	This package contains built-in Gemma CLI applications.
ubic.gemma.core.analysis.sequence
ubic.gemma.core.loader.expression.arrayDesign
ubic.gemma.core.loader.expression.geo.service
ubic.gemma.persistence.service.expression.arrayDesign
ubic.gemma.persistence.service.expression.designElement
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.persistence.service.genome.taxon
ubic.gemma.persistence.util
ubic.gemma.rest.util.args
ubic.gemma.web.controller.expression.arrayDesign

Uses of ArrayDesignService in ubic.gemma.apps

Fields in ubic.gemma.apps declared as ArrayDesignService

Modifier and Type	Field	Description
protected ArrayDesignService	ArrayDesignSequenceManipulatingCli.arrayDesignService

Uses of ArrayDesignService in ubic.gemma.core.analysis.sequence

Constructors in ubic.gemma.core.analysis.sequence with parameters of type ArrayDesignService

Modifier	Constructor	Description
	ArrayDesignMapResultServiceImpl(BlatResultService blatResultService, BlatAssociationService blatAssociationService, ArrayDesignService arrayDesignService, CompositeSequenceService compositeSequenceService)

Uses of ArrayDesignService in ubic.gemma.core.loader.expression.arrayDesign

Constructors in ubic.gemma.core.loader.expression.arrayDesign with parameters of type ArrayDesignService

Modifier	Constructor	Description
	ArrayDesignMergeServiceImpl(ArrayDesignService arrayDesignService, ArrayDesignReportService arrayDesignReportService, ArrayDesignMergeHelperService mergeServiceHelper)
	ArrayDesignProbeMapperServiceImpl(AnnotationAssociationService annotationAssociationService, ArrayDesignAnnotationService arrayDesignAnnotationService, ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, ProbeMapper probeMapper, BioSequenceService bioSequenceService, BlatResultService blatResultService, CompositeSequenceService compositeSequenceService, ExpressionDataFileService expressionDataFileService, GeneProductService geneProductService, GeneService geneService, Persister persisterHelper, org.springframework.core.task.TaskExecutor taskExecutor)
	ArrayDesignSequenceAlignmentServiceImpl(ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, BioSequenceService bioSequenceService, Persister persisterHelper)
	ArrayDesignSequenceProcessingServiceImpl(ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, BioSequenceService bioSequenceService, ExternalDatabaseService externalDatabaseService, Persister persisterHelper, String fastaCmdExe)

Uses of ArrayDesignService in ubic.gemma.core.loader.expression.geo.service

Fields in ubic.gemma.core.loader.expression.geo.service declared as ArrayDesignService

Modifier and Type	Field	Description
protected ArrayDesignService	GeoBrowserServiceImpl.arrayDesignService

Uses of ArrayDesignService in ubic.gemma.persistence.service.expression.arrayDesign

Classes in ubic.gemma.persistence.service.expression.arrayDesign that implement ArrayDesignService

Modifier and Type	Class	Description
class	ArrayDesignServiceImpl

Uses of ArrayDesignService in ubic.gemma.persistence.service.expression.designElement

Constructors in ubic.gemma.persistence.service.expression.designElement with parameters of type ArrayDesignService

Modifier	Constructor	Description
	CompositeSequenceServiceImpl(CompositeSequenceDao compositeSequenceDao, BioSequenceService bioSequenceService, GeneProductService geneProductService, BlatResultService blatResultService, ArrayDesignService arrayDesignService)

Uses of ArrayDesignService in ubic.gemma.persistence.service.expression.experiment

Constructors in ubic.gemma.persistence.service.expression.experiment with parameters of type ArrayDesignService

Modifier	Constructor	Description
	GeeqServiceImpl(GeeqDao geeqDao, ExpressionExperimentService expressionExperimentService, ExpressionExperimentBatchInformationService expressionExperimentBatchInformationService, ArrayDesignService arrayDesignService, ExpressionDataMatrixService expressionDataMatrixService, OutlierDetectionService outlierDetectionService, AuditTrailService auditTrailService, SampleCoexpressionAnalysisService sampleCoexpressionAnalysisService)

Uses of ArrayDesignService in ubic.gemma.persistence.service.genome.taxon

Methods in ubic.gemma.persistence.service.genome.taxon with parameters of type ArrayDesignService

Modifier and Type	Method	Description
void	TaxonServiceImpl.setArrayDesignService(ArrayDesignService arrayDesignService)

Uses of ArrayDesignService in ubic.gemma.persistence.util

Methods in ubic.gemma.persistence.util with parameters of type ArrayDesignService

Modifier and Type	Method	Description
org.springframework.core.convert.ConversionService	ValueObjectConfig.valueObjectConversionService(ArrayDesignService arrayDesignService, BibliographicReferenceService bibliographicReferenceService, BioSequenceService bioSequenceService, CompositeSequenceService compositeSequenceService, ExpressionExperimentService expressionExperimentService, ExpressionExperimentSetService experimentSetService, GeneService geneService, GeneSetService geneSetService, BlacklistedEntityService blacklistedEntityService)

Uses of ArrayDesignService in ubic.gemma.rest.util.args

Constructors in ubic.gemma.rest.util.args with parameters of type ArrayDesignService

Modifier	Constructor	Description
	DatasetArgService(ExpressionExperimentService service, SearchService searchService, ArrayDesignService adService, BioAssayService baService, OutlierDetectionService outlierDetectionService)
	PlatformArgService(ArrayDesignService service, ExpressionExperimentService eeService, CompositeSequenceService csService)

Uses of ArrayDesignService in ubic.gemma.web.controller.expression.arrayDesign

Methods in ubic.gemma.web.controller.expression.arrayDesign with parameters of type ArrayDesignService

Modifier and Type	Method	Description
void	ArrayDesignFormController.setArrayDesignService(ArrayDesignService arrayDesignService)