Uses of Interface
ubic.gemma.persistence.service.expression.arrayDesign.ArrayDesignService

Packages that use ArrayDesignService

Package	Description
ubic.gemma.core.analysis.sequence
ubic.gemma.core.apps
ubic.gemma.core.loader.expression.arrayDesign
ubic.gemma.core.loader.expression.geo.service
ubic.gemma.persistence.service.expression.arrayDesign
ubic.gemma.persistence.service.expression.designElement
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.persistence.service.genome.taxon
ubic.gemma.persistence.util
ubic.gemma.rest
ubic.gemma.rest.util.args
ubic.gemma.web.controller.expression.arrayDesign
ubic.gemma.web.propertyeditor
ubic.gemma.web.services

Uses of ArrayDesignService in ubic.gemma.core.analysis.sequence

Constructors in ubic.gemma.core.analysis.sequence with parameters of type ArrayDesignService

Constructor	Description
ArrayDesignMapResultServiceImpl(BlatResultService blatResultService, BlatAssociationService blatAssociationService, ArrayDesignService arrayDesignService, CompositeSequenceService compositeSequenceService)

Uses of ArrayDesignService in ubic.gemma.core.apps

Methods in ubic.gemma.core.apps that return ArrayDesignService

Modifier and Type	Method	Description
protected ArrayDesignService	ArrayDesignSequenceManipulatingCli.getArrayDesignService()

Uses of ArrayDesignService in ubic.gemma.core.loader.expression.arrayDesign

Constructors in ubic.gemma.core.loader.expression.arrayDesign with parameters of type ArrayDesignService

Constructor	Description
ArrayDesignMergeServiceImpl(ArrayDesignService arrayDesignService, ArrayDesignReportService arrayDesignReportService, ArrayDesignMergeHelperService mergeServiceHelper)
ArrayDesignProbeMapperServiceImpl(AnnotationAssociationService annotationAssociationService, ArrayDesignAnnotationService arrayDesignAnnotationService, ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, ProbeMapper probeMapper, BioSequenceService bioSequenceService, BlatResultService blatResultService, CompositeSequenceService compositeSequenceService, ExpressionDataFileService expressionDataFileService, GeneProductService geneProductService, GeneService geneService, Persister persisterHelper, org.springframework.core.task.TaskExecutor taskExecutor)
ArrayDesignSequenceAlignmentServiceImpl(ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, BioSequenceService bioSequenceService, Persister persisterHelper)
ArrayDesignSequenceProcessingServiceImpl(ArrayDesignReportService arrayDesignReportService, ArrayDesignService arrayDesignService, BioSequenceService bioSequenceService, ExternalDatabaseService externalDatabaseService, Persister persisterHelper)

Uses of ArrayDesignService in ubic.gemma.core.loader.expression.geo.service

Fields in ubic.gemma.core.loader.expression.geo.service declared as ArrayDesignService

Modifier and Type	Field	Description
protected ArrayDesignService	GeoBrowserServiceImpl.arrayDesignService

Uses of ArrayDesignService in ubic.gemma.persistence.service.expression.arrayDesign

Classes in ubic.gemma.persistence.service.expression.arrayDesign that implement ArrayDesignService

Modifier and Type	Class	Description
class	ArrayDesignServiceImpl

Uses of ArrayDesignService in ubic.gemma.persistence.service.expression.designElement

Constructors in ubic.gemma.persistence.service.expression.designElement with parameters of type ArrayDesignService

Constructor	Description
CompositeSequenceServiceImpl(CompositeSequenceDao compositeSequenceDao, BioSequenceService bioSequenceService, GeneProductService geneProductService, BlatResultService blatResultService, ArrayDesignService arrayDesignService)

Uses of ArrayDesignService in ubic.gemma.persistence.service.expression.experiment

Constructors in ubic.gemma.persistence.service.expression.experiment with parameters of type ArrayDesignService

Constructor

Description

GeeqServiceImpl(GeeqDao geeqDao, ExpressionExperimentService expressionExperimentService, ExpressionExperimentBatchInformationService expressionExperimentBatchInformationService, ArrayDesignService arrayDesignService, ExpressionDataMatrixService expressionDataMatrixService, OutlierDetectionService outlierDetectionService, AuditTrailService auditTrailService, SampleCoexpressionAnalysisService sampleCoexpressionAnalysisService)

Uses of ArrayDesignService in ubic.gemma.persistence.service.genome.taxon

Methods in ubic.gemma.persistence.service.genome.taxon with parameters of type ArrayDesignService

Modifier and Type	Method	Description
void	TaxonServiceImpl.setArrayDesignService(ArrayDesignService arrayDesignService)

Uses of ArrayDesignService in ubic.gemma.persistence.util

Methods in ubic.gemma.persistence.util with parameters of type ArrayDesignService

Modifier and Type	Method	Description
org.springframework.core.convert.ConversionService	ValueObjectConfig.valueObjectConversionService(ArrayDesignService arrayDesignService, BibliographicReferenceService bibliographicReferenceService, BioSequenceService bioSequenceService, CompositeSequenceService compositeSequenceService, ExpressionExperimentService expressionExperimentService, ExpressionExperimentSetService experimentSetService, GeneService geneService, GeneSetService geneSetService, BlacklistedEntityService blacklistedEntityService)

Uses of ArrayDesignService in ubic.gemma.rest

Constructors in ubic.gemma.rest with parameters of type ArrayDesignService

Constructor	Description
PlatformsWebService(GeneService geneService, ArrayDesignService arrayDesignService, CompositeSequenceService compositeSequenceService, ArrayDesignAnnotationService annotationFileService, PlatformArgService arrayDesignArgService, CompositeSequenceArgService probeArgService)	Constructor for service autowiring

Uses of ArrayDesignService in ubic.gemma.rest.util.args

Constructors in ubic.gemma.rest.util.args with parameters of type ArrayDesignService

Constructor	Description
DatasetArgService(ExpressionExperimentService service, SearchService searchService, ArrayDesignService adService, BioAssayService baService, OutlierDetectionService outlierDetectionService)
PlatformArgService(ArrayDesignService service, ExpressionExperimentService eeService, CompositeSequenceService csService)

Uses of ArrayDesignService in ubic.gemma.web.controller.expression.arrayDesign

Methods in ubic.gemma.web.controller.expression.arrayDesign with parameters of type ArrayDesignService

Modifier and Type	Method	Description
void	ArrayDesignFormController.setArrayDesignService(ArrayDesignService arrayDesignService)

Uses of ArrayDesignService in ubic.gemma.web.propertyeditor

Constructors in ubic.gemma.web.propertyeditor with parameters of type ArrayDesignService

Constructor	Description
ArrayDesignPropertyEditor(ArrayDesignService arrayDesignService)

Uses of ArrayDesignService in ubic.gemma.web.services

Methods in ubic.gemma.web.services with parameters of type ArrayDesignService

Modifier and Type	Method	Description
void	ArrayDesignIdentifierByNameEndpoint.setArrayDesignService(ArrayDesignService ads)	Sets the "business service" to delegate to.
void	Probe2GeneEndpoint.setArrayDesignService(ArrayDesignService arrayDesignService)