Package ubic.gemma.persistence.service.expression.experiment

@NonNullApi package ubic.gemma.persistence.service.expression.experiment

Classes

Class	Description
ExperimentalFactorServiceTest
ExpressionExperimentBatchInformationServiceTest
ExpressionExperimentDaoCursorTest	Integration tests for the keyset (cursor) pagination DAO mechanism on ExpressionExperimentDao.
ExpressionExperimentDaoTest
ExpressionExperimentDataVectorServiceTest	Lightweight unit test for ExpressionExperimentDataVectorServiceImpl that verifies delegation to the ExpressionExperimentDao and the create-if-needed orchestration of BioAssayDimensionService and QuantitationTypeService.
ExpressionExperimentDeleteTest
ExpressionExperimentFilterRewriteHelperServiceTest
ExpressionExperimentInCurationFilterIT	The inCuration filter behind the curation UI's "Experiments staged for curation" page.
ExpressionExperimentReadServiceAnnotationsTest	De-duplication contract of ExpressionExperimentReadServiceImpl.getAnnotations(ExpressionExperiment, boolean).
ExpressionExperimentServiceDetachedEntityTest	ExpressionExperimentService.isSingleCell(ExpressionExperiment) must not require its argument to be attached to a session.
ExpressionExperimentServiceImplTest
ExpressionExperimentServiceIntegrationTest
ExpressionExperimentServiceTest
ExpressionExperimentSetServiceTest	Tests for methods that perform operations on or with expressionExperiment sets
ExpressionExperimentSetValueObjectHelperImplTest	Unit tests for the taxon rule ExpressionExperimentSetValueObjectHelperImpl.updateMembers(Long, Collection) applies when replacing a set's membership.
ExpressionExperimentSetValueObjectHelperTest	Tests for methods that create ExpressionExperimentSetValueObjects from expressionExperiment entities
ExpressionExperimentSubSetDaoTest
ExpressionExperimentSubSetReadServiceTest	Lightweight unit test for ExpressionExperimentSubSetReadServiceImpl that verifies each public method delegates to the right ExpressionExperimentDao call without standing up a Spring context.
ExpressionExperimentSubSetServiceTest
FactorValueDaoTest
FactorValueNeedsAttentionServiceTest	Tests the Ticket-layer migration of FactorValueNeedsAttentionService (see CURATION_DETAILS_RETIREMENT.md).
FactorValueReadServiceTest	Lightweight unit test for FactorValueReadServiceImpl that verifies each public method delegates to the right FactorValueDao call without standing up a Spring context.
FactorValueServiceIntegrationTest
FactorValueServiceTest
GeeqCormatMaskingTest	The stored sample-correlation matrix keeps the outlier samples' values, so a curator can review the call against them.
GeeqScoringFailureTest	A scoring run that throws must not be saved and audited as if it had finished: the GeeqEvent is what runGeeq -auto uses to decide a dataset is done.
PreboardedExperimentMappingTest	Regression guard for the PreboardedExperiment discriminator mapping added in commit 44bf890061.
PreboardedExperimentServiceTest	Pure-Mockito unit tests for PreboardedExperimentServiceImpl: the 409-on-existing logic in createPreboarded, the promotion FK-rebind + workflow-state advance.
RandomExperimentalDesignUtils	Generate random experimental design for a given experiment.
RandomExpressionExperimentUtils
ReplaceAllRawDataVectorsQtCollisionTest	Fast H2-backed regression guard for the QT entity-identity collision that DataUpdater.addCountData re-run path tripped (commit ef838e08fc).
SingleCellExpressionExperimentServiceTest	Tests covering integration of single-cell.
SingleCellIntegrationTest
SingleCellStreamingAddTest	Tests for the streaming overload of SingleCellExpressionExperimentService.addSingleCellDataVectors(ExpressionExperiment, QuantitationType, SingleCellDimension, Stream, String, boolean, boolean).
StatementTagPersistenceTest	A statement-shaped experiment tag must survive the round trip as a Statement.
WorkflowServiceTest	Pure-Mockito unit tests for WorkflowServiceImpl: state-machine enforcement, idempotent no-op semantics, the disallowed-transition exception.