Uses of Package
ubic.gemma.model.expression.bioAssayData
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Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.analysis.expression.coexpression.links Class Description ProcessedExpressionDataVector Represents the processed data that is used for actual analyses. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.analysis.expression.diff Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.analysis.preprocess Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors.DesignElementDataVector MeanVarianceRelation ProcessedExpressionDataVector Represents the processed data that is used for actual analyses.RawExpressionDataVector Data for one design element, across one or more bioassays, for a single quantitation type. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.analysis.preprocess.filter Class Description ProcessedExpressionDataVector Represents the processed data that is used for actual analyses. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.analysis.preprocess.svd Class Description DoubleVectorValueObject Simple wrapper for a double[] that is derived from a DesignElementDataVector. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.analysis.service Class Description DesignElementDataVector ProcessedExpressionDataVector Represents the processed data that is used for actual analyses. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.datastructure.matrix Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors.DesignElementDataVector ProcessedExpressionDataVector Represents the processed data that is used for actual analyses.RawExpressionDataVector Data for one design element, across one or more bioassays, for a single quantitation type. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.core.visualization Class Description DoubleVectorValueObject Simple wrapper for a double[] that is derived from a DesignElementDataVector. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.model.analysis.expression.coexpression Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.model.analysis.expression.pca Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.model.common.quantitationtype Class Description DesignElementDataVector -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.model.expression.bioAssayData Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors.BioAssayDimensionValueObject DataVector An abstract class representing a one-dimensional vector of data about some aspect of an experiment.DataVectorValueObject DesignElementDataVector DoubleVectorValueObject Simple wrapper for a double[] that is derived from a DesignElementDataVector.ExperimentExpressionLevelsValueObject.GeneElementExpressionsValueObject ExperimentExpressionLevelsValueObject.VectorElementValueObject MeanVarianceRelation ProcessedExpressionDataVector Represents the processed data that is used for actual analyses.RawExpressionDataVector Data for one design element, across one or more bioassays, for a single quantitation type.SlicedDoubleVectorValueObject -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.model.expression.experiment Class Description MeanVarianceRelation ProcessedExpressionDataVector Represents the processed data that is used for actual analyses.RawExpressionDataVector Data for one design element, across one or more bioassays, for a single quantitation type. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.persistence.service.analysis.expression.pca Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.persistence.service.common.quantitationtype Class Description DataVector An abstract class representing a one-dimensional vector of data about some aspect of an experiment. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.persistence.service.expression.bioAssay Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.persistence.service.expression.bioAssayData Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors.BioAssayDimensionValueObject DesignElementDataVector DoubleVectorValueObject Simple wrapper for a double[] that is derived from a DesignElementDataVector.ExperimentExpressionLevelsValueObject ProcessedExpressionDataVector Represents the processed data that is used for actual analyses.RawExpressionDataVector Data for one design element, across one or more bioassays, for a single quantitation type. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.persistence.service.expression.experiment Class Description BioAssayDimension Stores the order of BioAssays referred to in DataVectors.MeanVarianceRelation ProcessedExpressionDataVector Represents the processed data that is used for actual analyses.RawExpressionDataVector Data for one design element, across one or more bioassays, for a single quantitation type. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.persistence.util Class Description DesignElementDataVector -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.rest Class Description ExperimentExpressionLevelsValueObject -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.rest.util.args Class Description DesignElementDataVector -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.web.controller.expression.experiment Class Description DoubleVectorValueObject Simple wrapper for a double[] that is derived from a DesignElementDataVector. -
Classes in ubic.gemma.model.expression.bioAssayData used by ubic.gemma.web.controller.visualization Class Description DoubleVectorValueObject Simple wrapper for a double[] that is derived from a DesignElementDataVector.