Uses of Interface
ubic.gemma.persistence.service.BaseImmutableService
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Uses of BaseImmutableService in ubic.gemma.core.annotation.reference
Subinterfaces of BaseImmutableService in ubic.gemma.core.annotation.reference Modifier and Type Interface Description interface
BibliographicReferenceService
Classes in ubic.gemma.core.annotation.reference that implement BaseImmutableService Modifier and Type Class Description class
BibliographicReferenceServiceImpl
Implementation of BibliographicReferenceService. -
Uses of BaseImmutableService in ubic.gemma.core.genome.gene.service
Subinterfaces of BaseImmutableService in ubic.gemma.core.genome.gene.service Modifier and Type Interface Description interface
GeneService
interface
GeneSetService
Service for managing gene setsClasses in ubic.gemma.core.genome.gene.service that implement BaseImmutableService Modifier and Type Class Description class
GeneServiceImpl
class
GeneSetServiceImpl
Service for managing gene sets -
Uses of BaseImmutableService in ubic.gemma.persistence.service
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service Modifier and Type Interface Description interface
BaseService<O extends Identifiable>
Interface that supports basic CRUD operations.Classes in ubic.gemma.persistence.service that implement BaseImmutableService Modifier and Type Class Description class
AbstractFilteringVoEnabledService<O extends Identifiable,VO extends IdentifiableValueObject<O>>
Base implementation forFilteringVoEnabledService
.class
AbstractService<O extends Identifiable>
Base for all services handling DAO access.class
AbstractVoEnabledService<O extends Identifiable,VO extends IdentifiableValueObject<O>>
Created by tesarst on 01/06/17. -
Uses of BaseImmutableService in ubic.gemma.persistence.service.analysis
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.analysis Modifier and Type Interface Description interface
AnalysisService<T extends Analysis>
Provides basic services for dealing with analysesinterface
SingleExperimentAnalysisService<T extends SingleExperimentAnalysis>
Interface for analysis service manipulating single experiments. -
Uses of BaseImmutableService in ubic.gemma.persistence.service.analysis.expression.coexpression
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.analysis.expression.coexpression Modifier and Type Interface Description interface
CoexpressionAnalysisService
Deals with the Analysis objects for Coexpression - not the coexpression results themselves.Classes in ubic.gemma.persistence.service.analysis.expression.coexpression that implement BaseImmutableService Modifier and Type Class Description class
CoexpressionAnalysisServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.analysis.expression.diff
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.analysis.expression.diff Modifier and Type Interface Description interface
DifferentialExpressionAnalysisService
interface
GeneDiffExMetaAnalysisService
Classes in ubic.gemma.persistence.service.analysis.expression.diff that implement BaseImmutableService Modifier and Type Class Description class
DifferentialExpressionAnalysisServiceImpl
class
DifferentialExpressionResultServiceImpl
class
ExpressionAnalysisResultSetServiceImpl
class
GeneDiffExMetaAnalysisServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.analysis.expression.pca
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.analysis.expression.pca Modifier and Type Interface Description interface
PrincipalComponentAnalysisService
Classes in ubic.gemma.persistence.service.analysis.expression.pca that implement BaseImmutableService Modifier and Type Class Description class
PrincipalComponentAnalysisServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.association
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.association Modifier and Type Interface Description interface
Gene2GOAssociationService
Classes in ubic.gemma.persistence.service.association that implement BaseImmutableService Modifier and Type Class Description class
Gene2GOAssociationServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.association.phenotype.service
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.association.phenotype.service Modifier and Type Interface Description interface
PhenotypeAssociationService
Classes in ubic.gemma.persistence.service.association.phenotype.service that implement BaseImmutableService Modifier and Type Class Description class
PhenotypeAssociationServiceImpl
Service responsible for low level operations, used by PhenotypeAssociationManagerServiceImpl -
Uses of BaseImmutableService in ubic.gemma.persistence.service.common.auditAndSecurity
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.common.auditAndSecurity Modifier and Type Interface Description interface
AuditTrailService
Create and manipulate audit trails.interface
ContactService
Classes in ubic.gemma.persistence.service.common.auditAndSecurity that implement BaseImmutableService Modifier and Type Class Description class
AuditTrailServiceImpl
class
ContactServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.common.description
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.common.description Modifier and Type Interface Description interface
CharacteristicService
interface
DatabaseEntryService
interface
ExternalDatabaseService
Classes in ubic.gemma.persistence.service.common.description that implement BaseImmutableService Modifier and Type Class Description class
CharacteristicServiceImpl
class
DatabaseEntryServiceImpl
Spring Service base class forDatabaseEntryService
, provides access to all services and entities referenced by this service.class
ExternalDatabaseServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.common.protocol
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.common.protocol Modifier and Type Interface Description interface
ProtocolService
Classes in ubic.gemma.persistence.service.common.protocol that implement BaseImmutableService Modifier and Type Class Description class
ProtocolServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.common.quantitationtype
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.common.quantitationtype Modifier and Type Interface Description interface
QuantitationTypeService
Classes in ubic.gemma.persistence.service.common.quantitationtype that implement BaseImmutableService Modifier and Type Class Description class
QuantitationTypeServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.expression.arrayDesign
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.expression.arrayDesign Modifier and Type Interface Description interface
ArrayDesignService
interface
CuratableService<C extends Curatable,VO extends AbstractCuratableValueObject<C>>
Interface for curatable services.Classes in ubic.gemma.persistence.service.expression.arrayDesign that implement BaseImmutableService Modifier and Type Class Description class
ArrayDesignServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.expression.bioAssay
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.expression.bioAssay Modifier and Type Interface Description interface
BioAssayService
Classes in ubic.gemma.persistence.service.expression.bioAssay that implement BaseImmutableService Modifier and Type Class Description class
BioAssayServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.expression.bioAssayData
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.expression.bioAssayData Modifier and Type Interface Description interface
BioAssayDimensionService
Classes in ubic.gemma.persistence.service.expression.bioAssayData that implement BaseImmutableService Modifier and Type Class Description class
AbstractDesignElementDataVectorService<T extends DesignElementDataVector>
class
BioAssayDimensionServiceImpl
Spring Service base class forBioAssayDimensionService
, provides access to all services and entities referenced by this service.class
ProcessedExpressionDataVectorServiceImpl
class
RawAndProcessedExpressionDataVectorServiceImpl
class
RawExpressionDataVectorServiceImpl
Provides methods that can be applied to both RawExpressionDataVector and ProcessedExpressionDataVector -
Uses of BaseImmutableService in ubic.gemma.persistence.service.expression.biomaterial
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.expression.biomaterial Modifier and Type Interface Description interface
BioMaterialService
interface
CompoundService
Classes in ubic.gemma.persistence.service.expression.biomaterial that implement BaseImmutableService Modifier and Type Class Description class
BioMaterialServiceImpl
class
CompoundServiceImpl
Spring Service base class forCompoundService
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Uses of BaseImmutableService in ubic.gemma.persistence.service.expression.designElement
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.expression.designElement Modifier and Type Interface Description interface
CompositeSequenceService
Classes in ubic.gemma.persistence.service.expression.designElement that implement BaseImmutableService Modifier and Type Class Description class
CompositeSequenceServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.expression.experiment
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.expression.experiment Modifier and Type Interface Description interface
BlacklistedEntityService
interface
ExperimentalDesignService
interface
ExperimentalFactorService
interface
ExpressionExperimentService
interface
ExpressionExperimentSetService
interface
ExpressionExperimentSubSetService
interface
FactorValueService
Classes in ubic.gemma.persistence.service.expression.experiment that implement BaseImmutableService Modifier and Type Class Description class
BlacklistedEntityServiceImpl
class
ExperimentalDesignServiceImpl
Spring Service base class forubic.gemma.model.expression.experiment.ExperimentalDesignService
, provides access to all services and entities referenced by this service.class
ExperimentalFactorServiceImpl
class
ExpressionExperimentServiceImpl
class
ExpressionExperimentSetServiceImpl
Spring Service base class forubic.gemma.model.analysis.expression.ExpressionExperimentSetService
, provides access to all services and entities referenced by this service.class
ExpressionExperimentSubSetServiceImpl
class
FactorValueServiceImpl
Spring Service base class forFactorValueService
, provides access to all services and entities referenced by this service.class
GeeqServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.genome
Classes in ubic.gemma.persistence.service.genome that implement BaseImmutableService Modifier and Type Class Description class
ChromosomeServiceImpl
Spring Service base class forChromosomeService
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Uses of BaseImmutableService in ubic.gemma.persistence.service.genome.biosequence
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.genome.biosequence Modifier and Type Interface Description interface
BioSequenceService
Classes in ubic.gemma.persistence.service.genome.biosequence that implement BaseImmutableService Modifier and Type Class Description class
BioSequenceServiceImpl
Spring Service base class forBioSequenceService
, provides access to all services and entities referenced by this service. -
Uses of BaseImmutableService in ubic.gemma.persistence.service.genome.gene
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.genome.gene Modifier and Type Interface Description interface
GeneProductService
Classes in ubic.gemma.persistence.service.genome.gene that implement BaseImmutableService Modifier and Type Class Description class
GeneProductServiceImpl
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Uses of BaseImmutableService in ubic.gemma.persistence.service.genome.sequenceAnalysis
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.genome.sequenceAnalysis Modifier and Type Interface Description interface
AnnotationAssociationService
interface
BlatAssociationService
interface
BlatResultService
Classes in ubic.gemma.persistence.service.genome.sequenceAnalysis that implement BaseImmutableService Modifier and Type Class Description class
AnnotationAssociationServiceImpl
class
BlatAssociationServiceImpl
Spring Service base class forBlatAssociationService
, provides access to all services and entities referenced by this service.class
BlatResultServiceImpl
Spring Service base class forBlatResultService
, provides access to all services and entities referenced by this service. -
Uses of BaseImmutableService in ubic.gemma.persistence.service.genome.taxon
Subinterfaces of BaseImmutableService in ubic.gemma.persistence.service.genome.taxon Modifier and Type Interface Description interface
TaxonService
Classes in ubic.gemma.persistence.service.genome.taxon that implement BaseImmutableService Modifier and Type Class Description class
TaxonServiceImpl
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